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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s97 | supercontig | LSalAtl2s97:2592838..2599454 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012860 >EMLSAP00000012860 ID=EMLSAP00000012860|Name=EMLSAP00000012860|organism=Lepeophtheirus salmonis|type=polypeptide|length=945bp
MPDHHRTKASSNAFDSPLSLVVAHEDRLKEEEKNHGSSPGRSSGFSDGSG
DENYHRQRLASEGDLPLSLVVRSLGEIESYDSGHEEDHHHHAHHRVILEE
PDVTIAKVMVNAGSEKSGIKIKDFAKLLCEKSEDNALSSEVHSEYSSYEE
VHPQAWNGSSGXLSGKESFPCEFCDKIFINKYHLQSHLVTHTGERSFECR
KCHKTFGRKSTLRAHMTTHTKVSNFMCPICDKACNDNNSLEEHIRMHTGE
KPFVCSICSKSYARKSHLNVHYRVHTGERPFVCLNCRKDFTEKRFLNDHI
QTAHSGQDGPLKCPNCFREFAYKTSLKQHLKKQMCVKNLSRTGNLANNNG
GNNNSNSNNNNNFSNNGSPNISCGNPSSNLSNNNNNTGSSHPHSKQFSCP
FCEKSYSWKQTLKQHVSMYHRNKVHTDEFWKYELTKHRRAVVDSKTNEDM
WKKQLGKHGSEQKADNTASNEMWLEQINQSSNPSKSALSAEMKLLALQSL
QSSLKLMKMQEEGGEQSSVNPQKDEQLPIASPVAEAAAVVPVPPPPPPLP
VPADPPSSQQDAGYLSLLAHISSAQRRVAEKEEALRSDSPSLPEEPAAKR
TQMWLAQLGRYRQKSVQYEIEKNHEELWEEQIAKIKQNPVKSPLEPVEIT
IDDDEEEVELNREEEDDEEGGYLHLGGVEEHEQEHHHHVPGLIMTEEANI
KEERAAEEERIIMGEPHDPLQLQLQAYEDQRGVSPPPSSPHQLKHIVSLP
NTHSPPSTCKMVPLMSALQVQATHQEDDPELISSDGSVLKSILLDRIGRK
RPSLDPTPVPPKANHQEDSTDILRRRLLGLKEEPVLLVVDVESDNNNKSS
NSSNSNIKNSSNKISNNLRDSNIKKDEQSSSPENNKSSPKKKEEEGKSSI
IEQKEHAPRQSNSSSPKPQRKDSTFAHTSVLKHLLHRYTESHNME back to topmRNA from alignment at LSalAtl2s97:2592838..2599454+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012860-708707 ID=EMLSAT00000012860-708707|Name=EMLSAT00000012860|organism=Lepeophtheirus salmonis|type=mRNA|length=6617bp|location=Sequence derived from alignment at LSalAtl2s97:2592838..2599454+ (Lepeophtheirus salmonis)
ATGCAAGCTAGTTGTTTTGAAGCAGAATATATTTTTTGATAAAAAAAAAG
TTAAGATTATTTACAATCATATATATTATTCATAATATATATTAAAACAG
TTAAGGAAGTCGAACAAACAGTGTTGAGAAGAAGTGATTGAGACTTGATT
CTACTTACCTACTTGGTATTGTAATTAACCAAAAGGATATTAATATCAAT
AATAAAGGATAAAAGAAGAACCCAGGATAGCCAACCCTCCAAAACAAATC
CTCACTATGCTTTGAGTCCACGGAGGGAGGAAGAGCAACCCTATTATTTT
ATCCTGTCATTGCGTATAACATAAAAATACATATTTATGTGAATTAAGAC
AAAAGTGAACAGATTTTCTCTTTTTTTTATCATCGAATATTTACCGAGAA
ATGTAAGTGTATAAATATTTTTTTTACTATTGAGTAGTGTTATGTGTTTA
TACTTGTATTTGCTGACTGACAGTACTTTTTAACTAACTAAGTAGGTCAA
CGTGAGTAGGGTAGATAATAATGTCGAACACACACAACAACAGACTTTTC
GTTCGTGTGAGTTGTAGGAGCTACTATTTGTGTACATAGTGGGGGAATAG
CTCTCAAAATTTGTAATGAGATACGGCTCACTCGAGTCAGTAATTATATA
CTAACTTGGGGATGCTCCTTCATTCATCCCTTCCTATCATTCAATTACTT
AATTAGTGTGTCCATTGTACTATTAATTACTACATTTATGGGAAGGGGGG
GGGGGAGGGMGGACAAAACAACGTAGGAATCCGATATCTTGGAGAGAGAT
GACGTCTTATCGTACGCTCAGTAAAAGTGTAAGTGAAACAGGAAAAAGAA
ATCCCGCTAGAGGGATACTAGTACTTCCAGCACCCTTCTCTCTTTTTTTC
ACCTTGAAGAATTAACGGTTTCCTTTTCTAAATGACTATGTACTATTATG
ATTCCTGAGTGGTTTGTCTTGGGTTTGCTTTATACCCGGAATGATTCAAA
ATGCTCACGTTTCGTCTTTCTTTTTTGCATAGACATATAAGTATTAACCA
ATTTACTACTTATAAGTAGTTAAACAATCATTTGTATATATCCTTGAGAG
TGCATTGAACTTTTTTGGTTGCAAATAAATATGATGTTTCTTCGCACGCC
TGAAAAGGGGTGGATAAATCCCGGATTGAAGGTCATGCGGAAATATTATT
ATTATTTACGCAAAAAAAAAAAATGGCGTCAAATATCTATTTAGCTTCAA
AATTTGGACATTAATTCCTATATTTGAGTGAGTAATTAAAACAAAATTCC
CTCCTACTCTACCCCTCCTAATATCAAGGACATTTGCCACTCTTGCTGAC
ACTAAATTTGAAGAGTATAAAATAGCAATAAAAGGAGCAATAATAAAAAC
CAGACGTCTAATTAATAAATTGAAAACGATAAATTTCTGTTTTTTGTTTT
TTTTTGTGCAGAATTTTCAATTTATTCGGTTTGGACTGGAAAAATAGTGT
TCAATGTACGTATTAAAATACATATACTATGTACATATGTAGACGAGACG
ACTGAAAAATAATAGCATTTGAGAGCAAAATTAGTATAGACTTGCATAAA
ATATGATATAAACACTTGCTAGATATTCATATTGACAATTTGTAGAGGGA
TTTTAATTAAACTAAATCTCTTATCATTTATCTATCAGTAGAGAGTTAGA
GAGGGGCACCCTCAGAATTTTATTTAGGGGGGGGGGGGGTGCTTAACTTT
CTTGGAGAAAGAAAAAAAAAAAGTTAAAATATTTATTTTTGCCCTAAATT
TAACCACATGACTTTTTTTTAGAAGACAAATCCTTTAGCATCAAAGTATA
AAGTAATGCATGTACTCATTAAAGACAAAGAGTAATACTCGAGAGGATAA
GTTATAATAACTTATTAAACTAACTAACTCTAAGAGGAGGTTGCTAGCCT
AAATTATTGGAGGGGGGGGGGGATTAGCCCCAAAAATTATCAACAKTATT
ATATAATTATTTACATATATGATAATAAATTTGGAGGAGGGGGCTTCATA
AACTTTTTGAGGGACTCAGCCCCAGGGGTTAGTGACACCAAATGAGTGTT
ATTTTCCTTCCTCTTTTAGCTAATTGACGTAGCTCTTTATTTTTCAAATT
GTGTGGGGTAACATGGTACACTTATGACTTGCCGATATGTAACAATAAAA
TAAACCCTGAAAAATTACAACACTTTGAATATCCCCTCGTCACTACAACT
GCCTTCCTTTCCTAACTTGTATATATATGTATGTAGTTTCAATACCCCCC
CAGGCTTATAATATAAAAGTATGCTTGTAATAGATATTTGATATATAGTA
GGAGCTATTATGGTATATGAATGAACCTACATGTAAGTCGGGGAAAATAA
AGGGTTAGCGAGGAGAGAAGTGGAACATGTTTGTACTGCTACGAATAAAA
CAAAAAAATCTTTAATTTTTTAAATATTTAAAAATATATATATATGAATA
AAACGAAGGCCAGGCATTGAACTCCACTTTTCAGTACTTTTTTTTTACGC
GCCCGACATTTACCTTGGAAATCAGTTTCCTTCTAATACTGCATAATATT
AAATAATAATATTTAAAAGGGTTCTCTATACGARGACGACGACGCATCCT
AAAATACCCCTTTGGGTTCAAGGACGTTCATCTAGAATTATCCTGTTTTA
ATAACATACATAACTCCTATAGTATATTAATAGTATGTGCACACTCGTAC
AGAGTAGTAGTCTCTCTACGAGTGTAGTGTAGGAATATGAAGAAGGAGCA
ACGCACGCTTTATTTTTTTTAAGGTAAAAGTGTATATGCTTAAGATTGGC
TAAAAAAAAGGGGGTAAGATATAATTTGACCTTAAAATGTTATTATTATT
ATTTTAAAGGCTTGCCTCAACTCTCACTCTTCTTTCGCAAAAGAAGGCTA
ATGACCCCAATATGGTTGGGATTCATTTCATAAACCAGGTAGAAGGATAC
TGAAAAAGTTACGAAATAAAAAGTTGTAAATAAAACAAGGTCGGCCGTTG
AACTTCTTTTTTTCTTTTCTTCTTCTATTAATGAAATAATATATTATGTA
TGTTTTGTAGTGGGGTGGGTTACTTATAATAGAATTCGTATTAGAAAAGA
GTGAGGAGACTGACTGACTTAACTAATTAACTATACTACTACACACATAA
AAGTGTGTTAAATATGTCTCTATAAAAATAGTAAGGATGTTGACCTAATT
ACTATTATAAGTAACTAATGTTATTTTTTTTTTCTCTCTCTCTTCTCGGA
ATAGTTGAAATAAACATGCCTGATCATCATCGTACAAAGGCCAGCAGCAA
TGCCTTTGACTCCCCTCTGTCCCTAGTTGTTGCCCACGAAGACCGGCTCA
AAGAAGAAGAAAAAAACCATGGGAGCTCACCTGGACGAAGCTCCGGTTTC
TCTGATGGAAGTGGTGATGAAAACTACCATAGACAAAGATTAGCATCTGA
AGGGGATCTACCTTTGTCATTGGTGGTACGAAGTCTTGGGGAAATTGAAT
CCTATGATAGTGGACATGAAGAGGACCATCATCACCATGCCCATCATCGT
GTCATTCTAGAAGAACCGGATGTGACCATTGCAAAGGTTATGGTAAATGC
CGGGTCAGAGAAATCTGGCATTAAAATAAAGGATTTCGCAAAGCTACTAT
GCGAAAAGTCAGAGGATAATGCTCTTTCATCAGAAGTACATTCCGAATAT
TCTTCCTATGAAGAAGTACATCCACAGGCCTGGAATGGTAGCAGCGGGAG
MCTCAGTGGGAAAGAAAGTTTTCCATGTGAATTCTGTGACAAGATTTTCA
TCAACAAGTACCATTTACAGTCTCATCTCGTGACTCATACTGGGGAGAGA
AGTTTTGAATGTAGGAAATGTCATAAAACCTTCGGAAGGAAATCCACTTT
GAGGGCCCACATGACTACTCATACTAAAGTCTCAAATTTCATGTGTCCCA
TCTGTGACAAGGCTTGCAATGATAATAATTCTCTCGAGGAGCACATTCGA
ATGCACACTGGGGAAAAACCCTTTGTGTGTAGCATTTGCTCTAAATCCTA
TGCCCGCAAATCCCATCTCAATGTTCACTATCGAGTTCATACGGGAGAAC
GTCCTTTTGTCTGCCTCAATTGTCGAAAAGACTTTACAGAAAAAAGATTT
TTGAATGATCATATTCAAACAGCTCATAGTGGGCAAGACGGACCTCTTAA
ATGTCCGAATTGCTTTAGGGAATTTGCTTACAAAACATCTCTTAAACAGC
ATTTAAAAAAACAAATGTGTGTCAAGAACTTGAGTAGAACTGGTAACTTG
GCCAACAACAATGGGGGGAACAATAACTCCAATAGCAACAACAATAATAA
TTTTAGTAATAATGGATCCCCGAATATCTCCTGTGGGAATCCTTCCTCAA
ATCTATCTAATAATAACAATAACACTGGATCCTCTCATCCTCACTCCAAG
CAATTTTCCTGTCCCTTTTGTGAAAAAAGCTACAGCTGGAAACAAACACT
TAAACAGGTATGTTTGTCTTTGACTGACTCAGTCATTATCATCTGATTCC
TATTTATATATTTACTTTTTCTCTTCCACAATAGCATGTTTCCATGTATC
ACCGTAATAAAGTTCATACCGATGAGTTTTGGAAATATGAACTCACCAAG
CATCGGCGAGCTGTCGTGGATTCCAAAACTAATGAGGACATGTGGAAGAA
ACAACTTGGAAAGCATGGATCTGAGCAGAAGGCAGATAATACTGCAAGCA
ATGAAATGTGGTTAGAACAAATTAATCAATCTTCCAATCCTTCGAAATCT
GCATTGTCAGCAGAAATGAAGCTCTTGGCTCTCCAATCCCTACAATCGTC
TCTAAAACTGATGAAAATGCAAGAAGAGGGTGGGGAACAGAGTAGTGTAA
ATCCTCAAAAGGATGAGCAACTCCCAATAGCCTCTCCAGTAGCAGAAGCA
GCCGCAGTAGTTCCAGTKCCACCACCTCCTCCTCCACTACCAGTCCCAGC
AGACCCTCCGTCCTCTCAACAAGATGCTGGATATTTGTCACTACTAGCAC
ACATTAGCAGTGCACAGAGAAGAGTTGCCGAAAAGGAAGAAGCTCTTCGA
TCGGACTCACCCTCTCTACCAGAAGAGCCTGCTGCTAAGAGGACACAAAT
GTGGTTAGCTCAGTTAGGTCGCTATCGTCAGAAATCTGTTCAATACGAAA
TTGAAAAGAATCATGAAGAGCTCTGGGAAGAGCAAATTGCCAAAATTAAG
CAAAATCCCGTAAAATCCCCCTTAGAGCCCGTCGAAATTACAATAGATGA
CGATGAAGAGGAGGTGGAACTCAATAGAGAGGAAGAAGATGATGAAGAAG
GAGGCTATCTTCATCTAGGAGGAGTAGAGGAGCACGAACAAGAGCATCAT
CATCATGTTCCCGGACTCATTATGACTGAAGAAGCAAACATAAAGGAGGA
AAGGGCGGCAGAAGAAGAGCGAATAATAATGGGTGAGCCGCATGATCCAC
TACAGCTACAACTTCAAGCTTATGAAGACCAAAGGGGCGTGTCTCCTCCC
CCATCCTCCCCTCATCAGCTCAAGCACATTGTATCTCTTCCGAATACGCA
TTCTCCCCCTTCTACCTGCAAAATGGTTCCGCTAATGTCAGCACTTCAAG
TTCAAGCGACTCATCAAGAAGATGATCCTGAACTGATCTCATCTGATGGA
TCTGTTTTAAAATCCATACTATTGGATAGAATTGGTAGAAAACGACCCAG
TCTAGATCCCACTCCAGTTCCACCCAAAGCGAATCATCAAGAAGATTCAA
CTGATATTTTGAGGAGACGACTCCTTGGGCTAAAGGAAGAGCCTGTTCTT
CTTGTTGTGGATGTTGAGTCCGATAACAATAACAAAAGTAGTAATTCTAG
TAATTCTAATATTAAAAATAGTAGTAATAAAATCAGCAACAACCTCCGTG
ATAGTAACATAAAAAAAGATGAGCAGTCTTCGTCTCCTGAAAATAACAAG
TCATCCCCGAAGAAGAAGGAGGAGGAAGGCAAGTCCTCAATTATAGAACA
AAAGGAACATGCTCCAAGGCAATCCAACAGTTCTTCTCCAAAACCACAAA
GAAAGGATTCAACCTTTGCTCACACCTCTGTTCTGAAACACCTACTCCAT
AGATACACTGAGAGTCACAACATGGAGTAATAATAATACTTCATAGATAC
TATAGACTTTTTTGTCATCTTTTTTTTAACTCTTCCTCTATGGAGTAAAA
AAAGAACTACATAAAATAAACCCTTACATCCATCTTGTTCAAACGGAGCT
TTTAGGTTGAATTATAATTGTACTATCCTTAATCCTTATCCTTACAAAAT
CATTGGTAAATGATTCAGGAGCTCTGTCGTTGTTGTAGTTTAATTAATTA
ATAATAATAATTTCTTAGGTCAATTCTTTTATTACTACATACTACTATTC
TTATTTTCCATGTCTGTCTGTCTGTTGTTATTCCAAAAAACACGAACCTG
CAATTGTATACAGTTTTATATCATATTGTTTTTATATACATATTACCTAT
ATACTTTTTTTTAGTTT back to top
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