EMLSAP00000012860, EMLSAP00000012860 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012860
Unique NameEMLSAP00000012860
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length945
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 311..331
e-value: 29.0
score: 9.2
coord: 253..275
e-value: 0.0012
score: 28.1
coord: 397..420
e-value: 0.015
score: 24.5
coord: 281..304
e-value: 1.1
score: 18.3
coord: 197..219
e-value: 0.0025
score: 27.0
coord: 169..191
e-value: 0.0022
score: 27.3
coord: 225..247
e-value: 2.4E-4
score: 30.4
IPR007087Zinc finger, C2H2PFAMPF00096zf-C2H2coord: 397..420
e-value: 0.01
score: 16.0
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 199..219
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 227..247
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 399..420
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 171..191
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 283..304
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 255..275
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 169..196
score: 13.38
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 281..309
score: 11.177
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 397..425
score: 9.556
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 225..252
score: 14.42
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 253..280
score: 16.311
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 197..220
score: 12.154
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 165..188
e-value: 1.5E-6
score: 27.2
coord: 390..418
e-value: 1.0E-4
score: 21.3
coord: 273..304
e-value: 4.5E-11
score: 41.7
coord: 189..221
e-value: 1.7E-12
score: 46.2
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 225..253
e-value: 1.0E-11
score: 44.2
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 254..272
e-value: 1.4E-13
score: 50.0
NoneNo IPR availablePFAMPF13465zf-H2C2_2coord: 212..234
e-value: 2.7E-4
score: 20.9
coord: 267..291
e-value: 6.9E-6
score: 25.9
coord: 183..207
e-value: 2.0E-5
score: 24.4
coord: 239..263
e-value: 7.3E-8
score: 32.2
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 312..332
e-value: 0.11
score: 12.7
NoneNo IPR availablePANTHERPTHR11389ZINC FINGER PROTEINcoord: 164..572
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 224..281
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 168..219
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 389..424
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 275..329

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012860 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012860EMLSAT00000012860-708707Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012860 ID=EMLSAP00000012860|Name=EMLSAP00000012860|organism=Lepeophtheirus salmonis|type=polypeptide|length=945bp
MPDHHRTKASSNAFDSPLSLVVAHEDRLKEEEKNHGSSPGRSSGFSDGSG
DENYHRQRLASEGDLPLSLVVRSLGEIESYDSGHEEDHHHHAHHRVILEE
PDVTIAKVMVNAGSEKSGIKIKDFAKLLCEKSEDNALSSEVHSEYSSYEE
VHPQAWNGSSGXLSGKESFPCEFCDKIFINKYHLQSHLVTHTGERSFECR
KCHKTFGRKSTLRAHMTTHTKVSNFMCPICDKACNDNNSLEEHIRMHTGE
KPFVCSICSKSYARKSHLNVHYRVHTGERPFVCLNCRKDFTEKRFLNDHI
QTAHSGQDGPLKCPNCFREFAYKTSLKQHLKKQMCVKNLSRTGNLANNNG
GNNNSNSNNNNNFSNNGSPNISCGNPSSNLSNNNNNTGSSHPHSKQFSCP
FCEKSYSWKQTLKQHVSMYHRNKVHTDEFWKYELTKHRRAVVDSKTNEDM
WKKQLGKHGSEQKADNTASNEMWLEQINQSSNPSKSALSAEMKLLALQSL
QSSLKLMKMQEEGGEQSSVNPQKDEQLPIASPVAEAAAVVPVPPPPPPLP
VPADPPSSQQDAGYLSLLAHISSAQRRVAEKEEALRSDSPSLPEEPAAKR
TQMWLAQLGRYRQKSVQYEIEKNHEELWEEQIAKIKQNPVKSPLEPVEIT
IDDDEEEVELNREEEDDEEGGYLHLGGVEEHEQEHHHHVPGLIMTEEANI
KEERAAEEERIIMGEPHDPLQLQLQAYEDQRGVSPPPSSPHQLKHIVSLP
NTHSPPSTCKMVPLMSALQVQATHQEDDPELISSDGSVLKSILLDRIGRK
RPSLDPTPVPPKANHQEDSTDILRRRLLGLKEEPVLLVVDVESDNNNKSS
NSSNSNIKNSSNKISNNLRDSNIKKDEQSSSPENNKSSPKKKEEEGKSSI
IEQKEHAPRQSNSSSPKPQRKDSTFAHTSVLKHLLHRYTESHNME
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