EMLSAT00000012956, EMLSAT00000012956-708803 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012956
Unique NameEMLSAT00000012956-708803
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:1115029..1117349 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012956 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012956EMLSAG00000012956-695722Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058198EMLSAE00000058198-767126Lepeophtheirus salmonisexon
EMLSAE00000058199EMLSAE00000058199-767127Lepeophtheirus salmonisexon
EMLSAE00000058200EMLSAE00000058200-767128Lepeophtheirus salmonisexon
EMLSAE00000058201EMLSAE00000058201-767129Lepeophtheirus salmonisexon
EMLSAE00000058202EMLSAE00000058202-767130Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780435auto780435Lepeophtheirus salmonispolypeptide
EMLSAP00000012956EMLSAP00000012956Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012956

>EMLSAP00000012956 ID=EMLSAP00000012956|Name=EMLSAP00000012956|organism=Lepeophtheirus salmonis|type=polypeptide|length=463bp
MTSLTKYTPLLRGFQASYVCGARSESTKTKFGPLKDSDRIFTNLYGRHDW
RLKGAMSRGDWYKTKEIVLKGADWIINEVKVSGLRGRGGAGFPSGMKWSF
MQKPDDGRPKYLVINADEGEPGTCKDREIMRHDPHKLIEGCLIAGRAMGA
RAAYIYVRGEFYNETTNLQVAIKEAYTKGFLGKNSCGTGYDFDVFVHRGA
GAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVA
PTICRRGGTWFSSFGRPRNTGTKLFNVSGHVNNPCTVEEEMSVPLKELIE
RHAGGVIGGWXNLLAVIPGGSSTPLIPKHVCNDVMMDFDALIAAQTGLGT
AAVIVMNKQCDVVKAIARLAXFYKXZXCGQCTPCREGCNWMDTMMWRFVE
GNAQAGEIDMLWELTKQIEGHTICALADGAAWPVQGLIRHFRPELEARFE
EYHRGKAAATSSV
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mRNA from alignment at LSalAtl2s98:1115029..1117349+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012956-708803 ID=EMLSAT00000012956-708803|Name=EMLSAT00000012956|organism=Lepeophtheirus salmonis|type=mRNA|length=2321bp|location=Sequence derived from alignment at LSalAtl2s98:1115029..1117349+ (Lepeophtheirus salmonis)
TGATGAAGTCAGAAGTACATATTAAAATATATAACGGCTGRTCTTACATA
AACTTTCATAACTGTCTGATCTAGACAAGGAAAGAAAAAAAAAGGCCAAT
TGGACCTTATTTTTCCTAATTTTGGATTAGTGAGTATAGGAAAAGGATCA
TGACATCATTGACAAAGTACACTCCACTTCTTCGTGGATTTCAAGGTAGG
AAAAAAAGGTCAAAGGAAATAGTTTGGGCTCTTAATTGTTGTTGTCGTTT
CTAGCGAGTTATGTGTGTGGTGCACGTTCGGAGTCGACCAAAACCAAGTT
TGGGCCGTTGAAAGACTCTGATAGAATATTCACGAACCTGTACGGACGCC
ATGACTGGCGTCTCAAGGGAGCTATGAGCCGAGGAGATTGGTATAAGACG
AAAGAGATTGTGTTAAAAGGGGCAGATTGGATCATTAATGAGGTGAAAGT
CTCTGGATTGCGCGGTCGGGGTGGAGCTGGGTTTCCCTCTGGAATGAAAT
GGAGTTTTATGCAAAAGCCTGATGATGGGAGGCCAAAGTATTTGGTGATT
AATGCGGATGAAGGAGAGCCAGGAACGTGTAAAGATCGTGAAATCATGAG
ACACGATCCTCATAAATTGATTGAAGGTTGTTTAATTGCGGGAAGAGCCA
TGGGGGCACGTGCCGCTTATATTTATGTGAGAGGAGAGTTCTACAATGAA
ACCACGAACTTGCAAGTGGCGATCAAAGAAGTAAAATATAAGGATTAGTT
CATGGGATTTCACTCCTACAAACTTTTTTATTTTTTGGTTTCAGGCATAC
ACTAAGGGTTTCCTTGGAAAGAATTCTTGTGGCACTGGCTATGACTTTGA
CGTATTCGTTCACAGAGGAGCAGGTGCTTATATTTGTGGAGAAGAAACCG
CTTTGATCGAATCACTTGAAGGCAAACAAGGAAAGCCACGTCTTAAGCCT
CCATTTCCTGCTGATGTTGGCGTTTTTGGTTGTCCGACAACCGTGACCAA
TGTTGAAACTGTAGCCGTTGCACCTACAATTTGTCGAAGAGGAGGKACAT
GGTTTTCTAGTTTTGGAAGACCTCGCAATACAGGAACGAAATTATTTAAT
GTGTCTGGACATGTCAACAATCCATGTACAGTTGAAGAAGAAATGTCTGT
TCCTCTAAAAGAATTGATTGAAAGACATGCTGGTGGTGTCATTGGAGGCT
GGGRTAATCTTTTAGCTGTAATTCCTGGAGGATCCTCAACTCCTTTAATC
CCTAAGCAGTAAGCACACTTACTTTTATAGTTTTTCCAATTAATCAAAGT
ATGGGATGATAATATGAAAAAGTTTTTAAAGACTTGCATTTATCTTGAAA
CAAGCATAATTCTAATTTATTTTCAAGTGTTTGTAATGATGTCATGATGG
ATTTTGACGCTCTCATTGCTGCACAAACTGGTTTAGGAACCGCAGCAGTC
ATTGTAATGAATAAACAATGCGATGTTGTTAAGGCAATCGCACGACTGGC
TAMTTTCTACAAAMACSAAWCATGTGGCCAATGTACTCCTTGCAGAGAAG
GATGCAATTGGATGGACACCATGATGTGGAGATTTGGTAAGGAATCTTTT
TCTTCCATTAACACATCAATCAATACTAATTATTATACTTTTAGTTGAAG
GTAATGCTCAAGCCGGAGAAATTGATATGTTATGGGAATTAACGAAGCAA
ATTGAGGGACATACCATCTGTGCCCTCGCTGATGGAGCTGCATGGCCTGT
TCAAGGTTTGATTCGACACTTTAGACCAGAGTTAGAAGCAAGATTTGAAG
AATATCATCGTGGTAAAGCTGCGGCTACATCCTCAGTTTAATACTATGTT
CAATATATGTTGTTAATATTAGATTTGAGTTATTTTACCATGCTTGTGCT
TGTAGTCATATAAAGCAAAACTTTCTAGGGATATTATCCTAAGTACTATT
TTAACTTAGTCTATTAAAGTAAAACTTAAATTCATTCTCTTTATTCTTAT
TGTAATAATTATGGGCTAAATATAGAAATGTATTTCTAAAAGGTTTCTTT
GTCTCTTCATCAACTAACGGAGCCAATATTGAATGTATTGTGTCTAATCG
ACCGTATTTATTCATGACTGCAAATAATGTAATTTTAGCTTGGTCTTAAA
GAGACAATAAAATGAGAAAATAATTCAAAACAAGCTAGTCTATATGTAGA
TATATTGAGTTTTATTTATCTGCATATTACATTTTGGGTGCTCAATTTTA
ATTTAGTTCATCACTTAACATTGATAAACTGGGAAGCAACAAATAAATTA
ATTATTATATAACATATTCCA
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