EMLSAT00000012989, EMLSAT00000012989-708836 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012989
Unique NameEMLSAT00000012989-708836
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:46525..48846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012989 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012989EMLSAG00000012989-695755Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058335EMLSAE00000058335-767263Lepeophtheirus salmonisexon
EMLSAE00000058336EMLSAE00000058336-767264Lepeophtheirus salmonisexon
EMLSAE00000058337EMLSAE00000058337-767265Lepeophtheirus salmonisexon
EMLSAE00000058338EMLSAE00000058338-767266Lepeophtheirus salmonisexon
EMLSAE00000058339EMLSAE00000058339-767267Lepeophtheirus salmonisexon
EMLSAE00000058340EMLSAE00000058340-767268Lepeophtheirus salmonisexon
EMLSAE00000058341EMLSAE00000058341-767269Lepeophtheirus salmonisexon
EMLSAE00000058342EMLSAE00000058342-767270Lepeophtheirus salmonisexon
EMLSAE00000058343EMLSAE00000058343-767271Lepeophtheirus salmonisexon
EMLSAE00000058344EMLSAE00000058344-767272Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770536auto770536Lepeophtheirus salmonispolypeptide
EMLSAP00000012989EMLSAP00000012989Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012989

>EMLSAP00000012989 ID=EMLSAP00000012989|Name=EMLSAP00000012989|organism=Lepeophtheirus salmonis|type=polypeptide|length=493bp
MGQNEILNEETPPRFFWTQKHIIRQIWVSIVSNFLQIIQGFVVAMSSIMI
PQLLHPADKNELLLTLDQSSWFATTLSIGYLLGSFVGAFNGTLFGQRISL
MIDCAICTTGLFIIRFSYSYPVLLIGAVLCNSKLYKYIELYLLGGVSSGS
GSVTIPIYSSEICQPEVRGLTGSFLMSFYIFGYCFTTLIACLVFFPILTG
IILFTCPNSPIWLIKKSRECEALKSFQYFSGNEKLAYQEFQRVYAHLKPK
MDSNKNGKPYKKFLSALNKVRCPSFRKPFMIIFFLTAMFFQWNGLGVISF
YMVTFVNKVGIPIEPYAAATVNCLVRAIFSAISFFWIAKYPRRKVYLLSI
TFMGIGTLMTSIYHVLLNNQYFSHWGLDEYEYLTKWIPALSYFTYASAAS
SGYLQITYMLQGELFPSDLRSIGCGIIGICDGISMIVATKFGLYALKNYG
VAIYFGYSTLVVLLCWIFVFLFLPETHRKHLVDIESSFKSKSK
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mRNA from alignment at LSalAtl2s98:46525..48846+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012989-708836 ID=EMLSAT00000012989-708836|Name=EMLSAT00000012989|organism=Lepeophtheirus salmonis|type=mRNA|length=2322bp|location=Sequence derived from alignment at LSalAtl2s98:46525..48846+ (Lepeophtheirus salmonis)
TAAAAATCAATATTATAATATTCATTTCATTGTTGATACATTTTACAATA
GGATAATTTCATTTAGGATAAATTAGTTACGATAAAAAAGTGTGTATTTT
TTACTCACGATGTTATTCATTGTCATTCAAGTACTAATTTTCTATAGTTT
TTTAAGTCTCTGCTATATAACATTTGTAAAATCGCCGCTTTACATTCATA
TATCATGGGACAAAATGAAATCTTAAATGAAGAAACTCCTCCTAGGTTTT
TTTGGACTCAAAAGCACATCATTCGTCAAGTAAATTAGAGTATTTATCCT
ATCCCATACTATCAGTTTCTATATTTTTTTCTAATGTAACTACAGATATG
GGTAAGTATCGTGTCCAACTTTTTACAAATTATACAAGGCTTTGTTGTTG
CAATGTCTTCCATCATGATTCCACAACTGCTTCATCCAGCAGACAAAAAT
GAGCTTCTTTTGACACTTGATCAAAGCTCCTGGTTTGGTGAGAGTTATAT
TAAAAAAAATCTCAAAATAACAACTCACATTCCTACATAAATATATAGCC
ACAACACTATCAATTGGATATTTATTGGGATCGTTCGTGGGAGCATTCAA
TGGTACTCTCTTTGGACAGAGAATTTCCCTAATGATTGATTGTGCAATTT
GTACTACGGGACTCTTTATCATTCGATTTTCCTATTCCTACCCCGTTCTT
CTTATTGGTGCAGTACTCTGTAACTCCAAATTATATAAATATATTGAATT
AGTAATTATGCAAGTATTTGTTAGGTGGTGTGTCATCAGGATCTGGATCT
GTGACAATTCCCATTTATTCAAGTGAAATTTGTCAGCCTGAAGTTAGAGG
ACTTACTGGAAGCTTTCTAATGAGTTTTTATATATTTGGATATTGCTTCA
CAACGCTCATTGGTAGCTTGATACATTGGAGACATGTTCTTTGTAATGTA
TATGCATACATATAGATAAATAGTTAACTTTAAATCTTTCACTTTTAGCT
TGCTTGGTCTTCTTTCCCATATTGACTGGAATTATTTTATTTACATGTCC
AAATTCTCCAATTTGGCTTATTAAAAAAAGTAGAGAGTGTGAGGCTTTAA
AGAGTTTCCAATATTTCAGTGGCAACGAAAAATTGGCTTATCAAGAGTTT
CAAAGGGTTTATGCACACTTAAAACCTAAAATGGATTCAAATAAGAATGG
TAAACCATATGTTAGTAGAAAATTATATGCATAAATACAGAAACATTCAA
TTTTAAAATAATTCACCATAGAAAAAGTTCCTCTCTGCTCTGAATAAAGT
TCGATGTCCATCCTTTCGAAAACCTTTTATGATTATATTTTTCTTAACGG
CCATGTTTTTTCAATGGAATGGCCTAGGAGTGATATCCTTTTATATGGTC
ACTTTTGTTAACGTAAGGTTAATACATTCTTTGAGACTTGAATATTTATT
TGATTTCTTTAGAAAGTTGGAATTCCAATTGAGCCTTATGCTGCTGCAAC
AGTCAATTGTTTAGTTAGAGCCATATTTAGTGCCATTTCCTTTTTTTGGA
TTGCTAAATATCCAAGGAGGAAAGTGTATTTGCTCTCCATTACCTTTATG
GGAATTGGAACTTTAATGACTTCCATTTATCATGTATTATTAAATAATGT
AAGTAAATAGTAAATAAGTTTGTTTCCCAATGTTATATTTCAAAAGCAAT
TTATGCCATCTGAGTATTTTAAGACTCTTTGGATTTTAATTTAAAAAAAA
TCTAAGTTACAATTATAAATAAACTCTAAAATATCTTCTCCAGCAATATT
TTAGTCACTGGGGTCTTGATGAATATGAGTATTTAACTAAATGGATTCCA
GCTCTTAGTTACTTCACATATGCATCAGCTGCTTCTTCTGGATATCTTCA
AATAACTTATATGTTACAAGGTGAGCTCTTTCCTTCAGACTTGAGATCCA
TTGGATGCGGTATTATTGGGATCTGTGATGGTATATCAATGATAGTAGCA
ACGAAGTTTGTAAGTACATTTAAAAAAACATACATATATCAGTATTATAT
TCATTACTTAATAAATTTTAGGGACTGTATGCACTCAAAAACTACGGAGT
TGCTATTTATTTTGGTTATTCCACTCTAGTCGTATTACTTTGTTGGATAT
TTGTTTTCCTCTTTTTACCAGAAACTCATAGGAAACACCTAGTTGACATT
GAAAGTTCATTCAAAAGTAAATCCAAATAGATTTGTATAGATTCTTTTTA
TAAAATATAGATATAATATCTTATTTAATTATTTTCACTTGTATGTTACT
GTCTATTATGGTAAATAAAAAT
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