EMLSAT00000013005, EMLSAT00000013005-708852 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000013005
Unique NameEMLSAT00000013005-708852
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:1428804..1432271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000013005 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000013005EMLSAG00000013005-695771Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058417EMLSAE00000058417-767345Lepeophtheirus salmonisexon
EMLSAE00000058418EMLSAE00000058418-767346Lepeophtheirus salmonisexon
EMLSAE00000058419EMLSAE00000058419-767347Lepeophtheirus salmonisexon
EMLSAE00000058420EMLSAE00000058420-767348Lepeophtheirus salmonisexon
EMLSAE00000058421EMLSAE00000058421-767349Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780742auto780742Lepeophtheirus salmonispolypeptide
EMLSAP00000013005EMLSAP00000013005Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000013005

>EMLSAP00000013005 ID=EMLSAP00000013005|Name=EMLSAP00000013005|organism=Lepeophtheirus salmonis|type=polypeptide|length=339bp
MYNVAFSLRPNEKHLKSENLFIFERIFITEPGAVTSKVPFTIDAQLYGEH
SFYIHGIHYIKSSKDFANADRLKIALHTNRRICFLSNRMKIEFGMKSIRR
CNFPWEGNLTQFESYSQANCLLECKLLNISEQCGCSSWFLRQNDRPICDY
SKKQRDCYIKTNEYFMDGICPCPSDCEMVHFFSGMGIEKYDSVDDFHSYE
WINPQNGRLRHYILDERNLHSTDIYRRLTRLSHGVESDEEFVIERFKKDV
AIVHFFFDTPVITQITTEMRLTVFDQISSIGGTLGLCTGVSIISFFEVMY
WILKFTRSQFLRLANGVSHINRKQINECYILDDSNSIIK
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mRNA from alignment at LSalAtl2s98:1428804..1432271-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000013005-708852 ID=EMLSAT00000013005-708852|Name=EMLSAT00000013005|organism=Lepeophtheirus salmonis|type=mRNA|length=3468bp|location=Sequence derived from alignment at LSalAtl2s98:1428804..1432271- (Lepeophtheirus salmonis)
ATGTATAACGTGGCATTTTCTCTCCGTCCCAATGAGAAGCATTTAAAATC
AGAGAACCTATTCATTTTTGAAAGAGTAAACTGTTGCAGTTTGTAATTAA
TAGTGTGCAATTTTCTTAAAAATATATTGTGGAAACACTCAGGACTTTTT
TGTATAAGTCAATAATAAAAGTAAATGTTTGCAACTTTGATAGACCAGAT
ATATATCCGTGACATAAATCACTAAAAATCTGTAATATTTCTTCACGCTA
ATAAATTTGAATTTTCAAAAATAAGGATAAATAATTCATAAGAACACTAA
TATCTTGTAGGTTGCCAACTTTTATTTTTTTTAAATGTATGCTCATGAGG
ATTTCGACAACTTTCACATCCCTACATTCGAATTAAATACTTTAAAACAG
TGCTTCTCTAACTATTGGTCCAAGAGCTTTGTTTAGGCTTACCCAATAAA
ATTGTGCACGTAAAATTGCGTGCAGGAAAAAGCCCCCCGGAAAGATGCCC
TCAGAAAGTTTACCCGTAGCAGAAATTTGCCGGCAGGAAAACTGCCGGAA
GGTAACTTTTCCTCCTGGAAATTTGCCCGCAGGAAAATTACTCTCAGAGG
AAAGTTGCCTAACGGAAAATTACCCTTAGTGGAAAATTGCCTGTAGGAAA
ATTGCCTTTTTAAGACAATTGCCTGCATGAGGGGTTTTTTAAACCCAAAT
ATTGCCAATTGTCTCAAAGGCGGCATACGTAGTTTTTACTACGCTCCGAG
CATAATTTGCATTGAAGGCTTTCTTTTATGTCTGTTTTATTATATATTTG
CGGGCATATTTCCGGCAGCCAATTTTCCTAAAAAGGGAATTTTCCTACAG
GCAAATTTTCACTGAGGGTAAGTTTATAGTGGACAACTTTTCTCTGGGGG
CAATTTCCTACGAGCAAATTTCCAGAGACGAGAAATTTGAAACGGGCAAT
TTTCCTGCGGCAAATTTCCGTTGCGGGCAATTTTCCAAGGGCTTCTTTCC
AAAAGGCTTTTTTCCTGCAGGCAATTTTCCTAGTGCCATAAAAATATGCT
TGTTTATTAAAAACACATAAGATCACAATTTTCTTAAGTGGTACATCCCA
TAAACATTGTTATCTCAGTTTTGCATCCTAATAAAAAAAAATTGTGAATC
AATTTCCTTATAAAGTATTATACTACACTTGGCTGTTGTTCACTGAATCT
ACAATTATMAAAGTTGATTATGATTATTTTTTGATTAGGCTTTTCAAGAT
ATTTATTACCGAACCAGGGGCTGTAACATCAAAGGTACCGTTTACAATTG
ACGCTCAATTGTATGGAGAGCATTCATTTTACATTCATGGAATACACTAC
ATAAAATCATCCAAAGATTTTGCCAATGCAGACAGGGTAATGTAAATCGT
AATTTTTATGTAGCCAAAGTCTGATCACAAAGTAGCTTTTGATTTCCGAA
TTCAATTCTTAAATTATTTTTTTAACGTGTTGATAGACAAGTCTACAAAG
TATGTTGCCAATATCAGCCCTTTTCCATGCATAGTTTGTTTTTGACAGGT
AATAAGGAATAAAGTCTTTTTGTGGGTTCCTTGATTTTATACTATTGAAA
AAATGAAAGAAAAAAACTATTTAGAAAATTCTGAGAAAACTTTTAAAAGT
TGTTTGTTATTTAAAATACAAAAGAACAATAATTATTTTTAGAAATTTCT
AAATTTTGAAGAATAAACAATCTTTCAATAGTTTTTAAAGAATTTTTCCT
ATAATAGGTTTTTTTTCCATTTTTTTTTTTTTTTCAATAGTTGAAAATTG
CACTGCACACCAATAGACGTATATGCTTTTTATCTGTAAAATATACTAAA
CCTTGAAATTGGCTCATTTTGCGGATACACAATGGTTGTAATCTAGGATG
ACTTACGTCTATTATATCTAGAGTGGATCTACGTGTGTCTATTTTGTCTG
AATACCTTTTATTAGTAAATAGTGCCTGAGAAGCTCCCTTAATAMATTGG
GGCTTCTATAGGGGGTGGGCTGGAGGGAGCTGAAATTATTTCTACAATTT
TTTTTCGCCATTTGAGCAAATTATGCAGGAGAACAAAAAAAATATATTTG
AATTATTTTTGCCAATGTTTTGAAAATAACAATTAATTTTTTGAAATTTT
TTTCCAAACATGTACAAACATTTAATTTTTTTTTAATTTAATATTTGAAA
TTATATATTTCAATACTTTCATTTTAACTTAATTTTTTAAATGTTTTCCA
AATTAAAAATTACGTGTATAACTATGAATATTCAAAAAAATTTCACCTAA
TTTTCATTTTCTGTGAATTACTTTCTTTGAATTTTTTTTCCCTAAGAATT
TAATTTTGTGTGAATATATGAATTTTTTTTCAACACATTAAAAACATTTA
GATTTTTTTTCATAAAAAAATTTCAAAAACCAAGCCCTTCAAAATATACT
TTTTCGGACGCCCTTGATATAGTATACGATTTATCTTATATATCACTCTA
TTTTACAACTCCACAGTGCTACCCAAAAGGCGACAGGTCAGAATACTTTT
TTAATTTCTTTACACGACAGTTGTGGGCATTTATAGTAACATTTTAATAA
TTAAAAAAATTAAGAATCGAATGAAAATTGAATTTGGAATGAAAGTAAAA
CTGTTTTTTTTCAATCAGAGTAGTATTTTTTTTATAACTCTTGAACACAA
TAATATTGAACATATTTGTACCATGTTTCATTTTAGTCGATCCGGCGTTG
TAATTTCCCATGGGAAGGAAATCTGACCCAATTTGAGTCCTATAGTCAAG
CCAATTGTCTCTTGGAGTGTAAACTGTTAAATATATCCGAACAATGTGGA
TGTTCTTCTTGGTTCCTACGTCAAAACGATCGCCCCATTTGCGACTATTC
AAAGAAACAGCGTGATTGCTACATCAAAACCAATGAGTACTTCATGGATG
GAATCTGCCCATGTCCCTCTGATTGCGAAATGGTTCATTTCTTCTCTGGG
ATGGGTATTGAGAAATATGATAGCGTAGATGACTTTCACTCCTATGAATG
GATCAACCCTCAAAATGGGAGACTTCGACACTACATTCTAGATGAAAGAA
ATCTCCATTCAACGGATATTTATCGACGTTTAACACGACTCTCTCACGGA
GTAGAGTCCGACGAGGAGTTTGTGATTGAGAGATTTAAAAAGGATGTGGC
CATTGTGCACTTCTTTTTTGATACTCCGGTTATAACACAAATTACAACAG
AAATGCGACTCACTGTATTTGATCAGATTTCTTCGATTGGTGGAACATTG
GGACTCTGCACGGGGGTTTCCATTATTTCCTTCTTTGAAGTGATGTATTG
GATATTAAAATTTACGAGATCTCAATTTCTGCGTTTAGCGAATGGGGTTT
CACATATTAATCGGAAGCAAATAAACGAATGCTACATTTTAGATGATAGC
AATTCCATCATTAAATAA
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