EMLSAT00000013008, EMLSAT00000013008-708855 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000013008
Unique NameEMLSAT00000013008-708855
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s991supercontigLSalAtl2s991:1262..2208 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000013008 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000013008EMLSAG00000013008-695774Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058428EMLSAE00000058428-767356Lepeophtheirus salmonisexon
EMLSAE00000058429EMLSAE00000058429-767357Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768215auto768215Lepeophtheirus salmonispolypeptide
EMLSAP00000013008EMLSAP00000013008Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000013008

>EMLSAP00000013008 ID=EMLSAP00000013008|Name=EMLSAP00000013008|organism=Lepeophtheirus salmonis|type=polypeptide|length=296bp
MEIVNNSMEEVRSILHSPRLHENKHEHLLSCPCCIKSFPNEGDLSSHIGS
THSPYQILCPFCDETNVSNLPSHLLTSHPDRLSQSKSNTNCLLSTLEDAN
LLLTVGSAPSSRPSSPIRTQLLADSIPVNLCLRRRKGASAPVSDDDSDNI
ILYPSVSNSQNATHTHSNSSRKRRKQTHVPDVNKDERYWARRLKNNEAAK
RSRDMRIKREKVIFEENARLEKLAKDLKNEVDRMAMDNKELTLKMGIIME
ENNRLKTLLSLFQQQXAKNHNMNNNNEHSKGITESDFDVDEYAGET
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mRNA from alignment at LSalAtl2s991:1262..2208-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000013008-708855 ID=EMLSAT00000013008-708855|Name=EMLSAT00000013008|organism=Lepeophtheirus salmonis|type=mRNA|length=947bp|location=Sequence derived from alignment at LSalAtl2s991:1262..2208- (Lepeophtheirus salmonis)
ATGGAGATTGTAAATAATTCAATGGAAGAAGTTAGGAGCATCCTGCACTC
ACCTCGTTTACATGAAAATGTAAGTTAACATTGTAATGTTTCTCATTTGA
TTGACTCACATCTTACTTTTTACAGAAACATGAGCATTTACTTTCATGTC
CATGTTGCATAAAATCATTTCCTAATGAAGGCGATCTTTCTTCTCACATA
GGATCAACTCATTCGCCCTATCAAATACTTTGCCCATTTTGTGATGAAAC
AAACGTGTCAAATCTACCATCACACCTCCTAACCTCCCATCCTGATAGGC
TCTCTCAGTCAAAGTCAAATACTAATTGTTTATTATCTACTCTTGAGGAC
GCCAATCTTTTATTAACAGTAGGCTCCGCTCCGTCCTCTCGGCCCAGTTC
TCCTATTAGAACGCAGCTCTTGGCTGATTCAATTCCGGTAAATTTATGTT
TAAGAAGACGTAAGGGAGCTTCAGCACCAGTGTCAGATGACGACTCTGAT
AACATTATACTATATCCTTCAGTATCAAATTCACAGAATGCCACTCATAC
ACATAGTAATTCTTCACGAAAACGGCGAAAGCAAACTCATGTACCAGATG
TTAACAAAGACGAACGTTATTGGGCACGACGTCTTAAGAACAATGAAGCT
GCAAAGCGAAGTCGAGATATGCGAATCAAACGTGAAAAAGTTATTTTCGA
GGAAAACGCACGTTTGGAAAAGTTAGCCAAGGATTTGAAGAATGAAGTTG
ATCGAATGGCCATGGATAATAAGGAATTAACTTTAAAAATGGGCATTATC
ATGGAGGAAAATAATCGACTTAAAACACTTTTAAGTCTTTTTCAGCAGCA
GRAAGCTAAAAACCATAACATGAATAACAACAATGAGCATAGTAAGGGGA
TAACAGAATCGGACTTTGATGTTGATGAATATGCTGGAGAAACATAA
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