EMLSAT00000013075, EMLSAT00000013075-708922 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000013075
Unique NameEMLSAT00000013075-708922
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s9supercontigLSalAtl2s9:866061..867617 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000013075 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000013075EMLSAG00000013075-695841Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058753EMLSAE00000058753-767681Lepeophtheirus salmonisexon
EMLSAE00000058754EMLSAE00000058754-767682Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779942auto779942Lepeophtheirus salmonispolypeptide
EMLSAP00000013075EMLSAP00000013075Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000013075

>EMLSAP00000013075 ID=EMLSAP00000013075|Name=EMLSAP00000013075|organism=Lepeophtheirus salmonis|type=polypeptide|length=352bp
MNLECLEDGPRTLYVGNLDVAXTXDLVLALFGQLGAVKGCKIIREGASDP
YCFVEFAHPASAAAALTAMNKRICLGKEMKVNWASSPGGSSDSVVHHNLP
KPDTSQHHHIFVGDLSPDITTETLKNAFVPFGEISDCKVVKDMLTNKSKG
YGFVSFVEKNDAQTAIEQMNGQWLGSRAIRTNWAARKPPAPYSKDTSNVN
KLNFEDVYRQASPRNFTVYCGGLINSDENIIRQTFSPFGRILEIRYFRDK
GYAFVRFDNKESACNAIVALHGSNVQGQSVKCSWGKESTETLGGGGGGGV
VXAPPAPQQPNANPQQQQQQYYQPYYMYNPHYITQMQQYYGQYGYCLNGE
QN
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mRNA from alignment at LSalAtl2s9:866061..867617-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000013075-708922 ID=EMLSAT00000013075-708922|Name=EMLSAT00000013075|organism=Lepeophtheirus salmonis|type=mRNA|length=1557bp|location=Sequence derived from alignment at LSalAtl2s9:866061..867617- (Lepeophtheirus salmonis)
ATGAATTTGGAATGTTTGGAAGATGGTCCTCGGACCCTGTACGTCGGGAA
TTTGGATGTGGCAGKTACGGRAGACCTGGTTCTGGCTCTCTTTGGCCAAT
TGGGAGCCGTCAAGGGTTGCAAAATCATACGGGAAGGAGCAAGTGATCCT
TATTGTTTCGTCGAATTCGCTCATCCAGCATCCGCTGCGGCTGCACTCAC
TGCAATGAATAAAAGGATCTGTTTAGGTCTCCATCTCGTTTCCTTTCTTC
TTTCTTTCTTTCACTCTTTTTAACATTTTTTCCCCTCTCTTGCCCTTTCC
CGAGATTTCCTTTCATATTTATTAAGTTTCTTTGATGTTGTGTCAATTTC
ACAGATAGATGAAACTTGTACACTCCTCATCGCATTTCCAAGTGACACGA
GGCATTAGTCCCTTTAATATGATGTATATATACAACTTCAGTGGTGAACA
CATTGTCTCCTTTTTAAAATAGGAATTCATTTACTGACTTTACATTAAGA
TCTNNNNNNNNNNCATTAAGACTCTCCGTCCCCCCCCCCCCCCTAGTCAA
AGAATCATGTCTATTTCAAATACGATTAAAATATTGGTCTCCTACATTAA
CAACTACACAATGTGCCCTCATATGTTAAAAAAACCCTCTTATTTCCTTA
TTAATATATGACAATGTGTCGTTTCGTTTTCCTAAATGCGGTGATTATAA
TGTAAGATTCTTCATATGTTTTAGGTAAAGAAATGAAAGTAAATTGGGCA
TCATCTCCAGGTGGAAGCTCCGACTCCGTAGTTCATCATAATCTACCAAA
GCCTGACACTTCTCAGCATCACCACATCTTTGTAGGAGATCTGAGTCCCG
ATATTACGACAGAAACCTTAAAAAACGCTTTTGTTCCATTCGGAGAAATT
TCTGACTGCAAAGTAGTGAAGGATATGCTAACAAATAAGTCTAAAGGCTA
TGGTTTTGTATCCTTTGTCGAGAAAAATGACGCCCAGACTGCTATTGAGC
AGATGAATGGACAATGGTTAGGAAGTCGTGCAATTCGCACAAACTGGGCG
GCTCGGAAGCCCCCTGCTCCCTACAGTAAAGATACGTCAAATGTGAATAA
GTTAAATTTTGAAGATGTATACCGTCAGGCCTCACCTCGTAACTTTACTG
TTTATTGCGGAGGATTGATTAATAGCGATGAGAATATCATCCGGCAGACC
TTTTCTCCCTTTGGACGTATACTTGAGATTCGATACTTTAGAGATAAAGG
CTACGCTTTCGTCCGATTTGATAATAAGGAGTCCGCATGTAATGCAATTG
TTGCTCTGCATGGCTCAAATGTGCAAGGACAAAGTGTTAAGTGTTCCTGG
GGTAAAGAATCTACAGAAACTCTTGGAGGGGGAGGAGGAGGAGGAGTAGT
ASCCGCCCCTCCCGCKCCCCAACAACCAAACGCAAACCCACAGCAACAGC
AACAACAATACTATCAACCGTATTATATGTATAATCCCCACTATATTACT
CAAATGCAACAGTACTATGGACAATATGGATATTGCTTGAATGGCGAGCA
AAATTAA
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