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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR013126 | Heat shock protein 70 family | PRINTS | PR00301 | HEATSHOCK70 | coord: 649..665 score: 51.27 coord: 315..328 score: 35.41 coord: 454..474 score: 40.69 coord: 343..355 score: 55.52 coord: 680..700 score: 48.32 |
IPR013126 | Heat shock protein 70 family | PFAM | PF00012 | HSP70 | coord: 316..994 e-value: 5.1E-159 score: 529.8 |
IPR001254 | Peptidase S1 | SMART | SM00020 | Tryp_SPc | coord: 64..298 e-value: 2.2E-53 score: 193.4 |
IPR001254 | Peptidase S1 | PFAM | PF00089 | Trypsin | coord: 65..298 e-value: 5.1E-40 score: 137.2 |
IPR001254 | Peptidase S1 | PROSITE | PS50240 | TRYPSIN_DOM | coord: 65..303 score: 26.919 |
None | No IPR available | GENE3D | 3.30.30.30 | | coord: 351..427 e-value: 3.0E-21 score: 74.8 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 167..302 e-value: 2.2E-32 score: 111.6 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 65..100 e-value: 5.8E-13 score: 48.0 |
None | No IPR available | GENE3D | 3.90.640.10 | | coord: 548..625 e-value: 7.0E-22 score: 76.8 |
None | No IPR available | GENE3D | 2.60.34.10 | | coord: 704..819 e-value: 4.0E-32 score: 110.7 coord: 860..887 e-value: 4.0E-32 score: 110.7 |
None | No IPR available | GENE3D | 1.20.1270.10 | | coord: 894..1008 e-value: 1.3E-25 score: 89.1 |
None | No IPR available | GENE3D | 3.30.420.40 | | coord: 428..513 e-value: 7.6E-42 score: 141.6 coord: 315..350 e-value: 7.6E-42 score: 141.6 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 101..166 e-value: 3.2E-14 score: 52.3 |
None | No IPR available | GENE3D | 3.30.420.40 | | coord: 514..547 e-value: 3.4E-16 score: 58.0 coord: 634..676 e-value: 3.4E-16 score: 58.0 |
None | No IPR available | PANTHER | PTHR19375:SF17 | HEAT SHOCK PROTEIN 70 (HSP70)-4 | coord: 305..1012 |
None | No IPR available | PANTHER | PTHR19375 | HEAT SHOCK PROTEIN 70KDA | coord: 305..1012 |
None | No IPR available | SUPERFAMILY | 100934 | Heat shock protein 70kD (HSP70), C-terminal subdomain | coord: 899..991 |
None | No IPR available | SUPERFAMILY | 100920 | Heat shock protein 70kD (HSP70), peptide-binding domain | coord: 701..821 |
None | No IPR available | SUPERFAMILY | 53067 | Actin-like ATPase domain | coord: 314..499 |
None | No IPR available | SUPERFAMILY | 53067 | Actin-like ATPase domain | coord: 510..697 |
IPR018114 | Peptidase S1, trypsin family, active site | PROSITE | PS00134 | TRYPSIN_HIS | coord: 105..110 |
IPR018114 | Peptidase S1, trypsin family, active site | PROSITE | PS00135 | TRYPSIN_SER | coord: 247..258 |
IPR018181 | Heat shock protein 70, conserved site | PROSITE | PS01036 | HSP70_3 | coord: 652..666 |
IPR009003 | Trypsin-like cysteine/serine peptidase domain | SUPERFAMILY | 50494 | Trypsin-like serine proteases | coord: 52..302 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000052 ID=EMLSAP00000000052|Name=EMLSAP00000000052|organism=Lepeophtheirus salmonis|type=polypeptide|length=1153bp METEEEDRDDILRNGASEDSDDYQLRGIDVTAESPNAFSEETSVRFAGEE ELSDESCGYTEPTRIRNGNDAGPHEHPWNVALLYKNDTMSKVLCGGVLIS ETEALTAAHCVRDFKGLLLTSILIGHSDINKATEVNLTGVTLHPNYSRTP IIVNDIAILHFDSIESIAEEVKIICMPLSDKFTRKDKYGVVSGWGVTELS LFSDNLKRLDVEIVEFEECQSLYKKKNKAFTLKDSQICASGQKEDSDSCS GDSGSPLLYYEPIEGRAVLLGLTSFGTRRCDSSVPGVYSKISSHLPWLRX AIAHARSILSPKKMSVVGIDFGNENCYISVARAGGIESIANDYSMRDTPS YVAFGDKQRLMGVAAKSQHLTNLKKTFFGFKPLIGRKFKDPIVQNELKRI PYPVSEDPETGNVLLHVDYLGKSHSFTPKQVTSMLFTKLKHTAEAALNTK VKDVVISVPTYYTDCERRCILDAANMADLNVLKLMNDTTATALAYGIYKQ DLPPPEEKARNVIFVDVGHRGAQAAACSFNKGKLSMVCNTFDANLGGRNL NENIARYFADGFKKSYKIDVYSSPKAMIKLITEVEKLKKQMSANTNKLPL NIECFMDDKDVKGYIDRTTFEEISQVEISRMEKILTDCLAQSKWKKEDIY SVEIVGGSTRVPFVKTAMERVFGKVPNTTLNADEAVSRGCALQCAILSPT FKVREFSVLDSQPYPILLKWQTGADIGEMEVFSKFQSIPFSKMLTFWQPD NFKLVVEYAGKDVTMNPHIGEFEISVTPKPDGSNTKVKVKARINLNGIFA IVSATKSEKHEIEEEVQMEVEEEKKPASANSGDKATNNTTSEDVNMDEPN EKATTEDKKDEKTPTSPPKMEKQKKIITKIIDXPVCSRVVGSLTDEGLTN LSGIERNFVKQDQMESDRLTYKNAVEEYVYDIRSKIHGDLSEFITDEDRG KYSNELEDSENWLYEDGEDVEKKVYVEKLNHLQVVGEALKRRKYEFDQRP HAFNTLGHCLNMATKVIDAFRSGDEKYNHLDTEAVNKVNNMIIEKNKWLS SSIHTLKDLDKTSDPSILVSYFYEEKKNFEAFAHPILHKAKPKVEPPPPP PTTQPNPEDDKTKNNAADNNTEGGDNSTSGMGEGAPPKPNKRTWEKRLPR LWL back to top
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