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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000584 | Voltage-dependent calcium channel, L-type, beta subunit | PRINTS | PR01626 | LCACHANNELB | coord: 347..363
score: 83.04
coord: 245..259
score: 77.65
coord: 368..383
score: 75.37
coord: 260..274
score: 100.0
coord: 384..395
score: 74.02 |
| IPR000584 | Voltage-dependent calcium channel, L-type, beta subunit | PANTHER | PTHR11824 | VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT | coord: 13..452 |
| IPR008145 | Guanylate kinase/L-type calcium channel beta subunit | SMART | SM00072 | GuKc | coord: 251..422
e-value: 2.3E-18
score: 77.0 |
| IPR008145 | Guanylate kinase/L-type calcium channel beta subunit | PFAM | PF00625 | Guanylate_kin | coord: 285..420
e-value: 3.6E-35
score: 120.9 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 244..431
e-value: 1.6E-77
score: 259.2 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 230..243
e-value: 1.7E-36
score: 124.9
coord: 85..197
e-value: 1.7E-36
score: 124.9 |
| None | No IPR available | PANTHER | PTHR11824:SF5 | VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT | coord: 13..452 |
| IPR001452 | Src homology-3 domain | PROSITE | PS50002 | SH3 | coord: 111..163
score: 9.65 |
| IPR001452 | Src homology-3 domain | SUPERFAMILY | 50044 | SH3-domain | coord: 84..206 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 250..423 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000182 ID=EMLSAP00000000182|Name=EMLSAP00000000182|organism=Lepeophtheirus salmonis|type=polypeptide|length=528bp
MTGYDGGGDAVIMSNRQTLNNINNRSMLEATAYDNLIRQGSGESSYSHPS
SEISLGDSYGGGIDPXSCHQPLPHQSVVMNAGYARDTEQNALICLERARS
KPVAFSVRTNVMYDGSQDDDSPVHGSAVSFHIGDFLHIFEKYDVNWWIGR
IVKEGCDIGFIPSPAKLEQLILQQAPVGKGSKLKSQSSGNIQQVMTNSRG
STPPTPGLDLDQNGDTGGSGVRVTAPPVIERKKGLLGKKQETLSPYDVVP
SIRPLVIVGPSLKGYEVTDMMQKAENHHYPCYCRHFFRKKSVLNNPSKRA
ILDKANFRSSNLAEVQSEIERIFELSRSMQLIVLDCDTVNHPSQLAKTSL
APIVVYLKISSPKVLQRLIKSRGKAQSRNLNVQMVAAEKLQQCPPEMFDV
ILDENQLDEACEHLTEXLDSYWRXANPPLKMGNXVPSTPATKARKSENNP
TSGTVTVPPDPNASPSGVGGGHMSSSHNRRGVSAGNGNGEQIPPQQNRRG
EHMMAEDIIIEEGDTTIKEVIANIHPMN back to top
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