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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR000562 | Fibronectin, type II, collagen-binding | SMART | SM00059 | FN2 | coord: 151..189
e-value: 0.025
score: 1.1
coord: 103..149
e-value: 9.2E-5
score: 20.8
coord: 39..87
e-value: 3.3E-5
score: 24.4 |
| IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 109..141
e-value: 2.1E-9
score: 36.6
coord: 155..186
e-value: 5.2E-7
score: 29.0 |
| IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 208..265
e-value: 2.5E-7
score: 29.9
coord: 35..89
e-value: 6.4E-11
score: 41.4 |
| IPR000562 | Fibronectin, type II, collagen-binding | PFAM | PF00040 | fn2 | coord: 110..141
e-value: 4.7E-8
score: 32.7
coord: 46..87
e-value: 7.9E-8
score: 32.0
coord: 158..186
e-value: 3.5E-6
score: 26.7
coord: 225..254
e-value: 3.9E-6
score: 26.6 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 105..152
score: 12.489 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 218..266
score: 10.771 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 41..89
score: 13.885 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 153..202
score: 10.96 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 224..254 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 102..152 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 38..87 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 158..187 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000209 ID=EMLSAP00000000209|Name=EMLSAP00000000209|organism=Lepeophtheirus salmonis|type=polypeptide|length=332bp
MGRVHLPAKVCTYLFLYFEKKWSYLYSIVVLSVSTSECKSTSGATCKFPF
GYKGEMYDQCTNVDFGNAFWCAVSVNKNGDVRGYGICSSDCPRYSNISKN
KYANKSGVACIFPYKYNGKTYEAYTTAGNSGFPWCATSLNVPEGYQVFCC
PTTNGKTCTFPFSWEGVNFDGCTDASNNGVQWCGVTIGSLDNNIKENMDC
SSSCRVAATASNSGCLSTQGLPHILPFIYKGVIYSKCTVQDLGSTFWCAT
SVNTAGNYLSFSTCSRSCPTNQLTSPEIGQAVSSSPEVWMCLPSPGIEKI
PVIVMISARHESKIIADTLKVAELYVKRELID back to top
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