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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | LRR_CC | coord: 450..475 e-value: 17.0 score: 12.7 coord: 387..412 e-value: 3.8 score: 16.5 coord: 476..501 e-value: 550.0 score: 1.0 coord: 415..440 e-value: 0.0024 score: 27.1 |
IPR001810 | F-box domain | SMART | SM00256 | FBOX | coord: 247..288 e-value: 5.3E-4 score: 29.3 |
IPR001810 | F-box domain | PROSITE | PS50181 | FBOX | coord: 241..288 score: 13.445 |
IPR001810 | F-box domain | SUPERFAMILY | 81383 | F-box domain | coord: 240..302 |
None | No IPR available | PFAM | PF12937 | F-box-like | coord: 245..289 e-value: 7.8E-13 score: 47.8 |
None | No IPR available | GENE3D | 3.80.10.10 | | coord: 243..532 e-value: 2.5E-39 score: 134.4 |
None | No IPR available | PFAM | PF13516 | LRR_6 | coord: 387..409 e-value: 0.28 score: 11.2 |
None | No IPR available | PANTHER | PTHR23125 | F-BOX/LEUCINE RICH REPEAT PROTEIN | coord: 98..533 |
None | No IPR available | PANTHER | PTHR23125:SF131 | HYPOTHETICAL PROTEIN CBG10273 | coord: 98..533 |
None | No IPR available | SUPERFAMILY | 52047 | RNI-like | coord: 358..531 |
IPR001611 | Leucine-rich repeat | PFAM | PF00560 | LRR_1 | coord: 417..438 e-value: 0.15 score: 12.0 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000232 ID=EMLSAP00000000232|Name=EMLSAP00000000232|organism=Lepeophtheirus salmonis|type=polypeptide|length=546bp MPLENEENTDEDSRSEEETNISNLPRSQLITNAECKKTDFPSYRNCKSNS SSNWAHTDLKIPTIKLNESFGPTSCDTSRKPHEFLNCFFETLVYNKVVCN CHEDSKLLNVIDLVEKLYYARNIALRQELGARLQLALHDFLEEFIHHMSE EEKVFQPLLNKYFDQKELENLLNTVLEQHRLWKEKVSAEKSLKLVKRKRK FDEDEYIAEIASAKMDHLRFRRSYCEEVNDFFGKRFTSAAVLRFEXLPNE IVIRIFGYLSPYHLISSCSRVSRKWNRLCVTPNIWRNLYPVMWARGHWSF HFDETLIESCIDDDKQYNFFDSDDDDDINNPIIKNDNGVNKEDKEAVFLG KMALYLLPKIGTGVRRLVLSGTRSLSSSTARSFLMKLPDLQHLKLSYCPN IDDDAFKGLRRYAALRQLRTLDLSGCKRLTDRTFERISSCYFPVRRARKM SQLRKISLSGVHNITNDGLDQLQLHAKTLEFVDLSGCFRLSGTHLNAFIS HCSQLKPENLYYCNMISNGPFPNSANGCQNLDCPLRNCCQLSTIRY back to top
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