EMLSAP00000000293, EMLSAP00000000293 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000293
Unique NameEMLSAP00000000293
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length865
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..275
NoneNo IPR availableCOILSCoilCoilcoord: 74..98
NoneNo IPR availableCOILSCoilCoilcoord: 41..69
NoneNo IPR availableCOILSCoilCoilcoord: 102..126
NoneNo IPR availableCOILSCoilCoilcoord: 130..200
NoneNo IPR availableCOILSCoilCoilcoord: 784..812
NoneNo IPR availableCOILSCoilCoilcoord: 458..487
NoneNo IPR availableCOILSCoilCoilcoord: 744..758
NoneNo IPR availableCOILSCoilCoilcoord: 759..772
NoneNo IPR availablePANTHERPTHR10290DNA TOPOISOMERASE Icoord: 66..865
NoneNo IPR availableSUPERFAMILY46596Eukaryotic DNA topoisomerase I, dispensable insert domaincoord: 741..812
IPR001631DNA topoisomerase IPRINTSPR00416EUTPISMRASEIcoord: 538..547
score: 32.5
coord: 683..697
score: 71.19
coord: 817..828
score: 72.92
coord: 625..641
score: 64.5
IPR013499DNA topoisomerase I, eukaryotic-typeSMARTSM00435TOPEUccoord: 509..837
e-value: 1.6E-146
score: 502.7
IPR013500DNA topoisomerase I, catalytic core, eukaryotic-typePFAMPF01028Topoisom_Icoord: 537..767
e-value: 1.5E-83
score: 279.3
IPR013030DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-typeGENE3D2.170.11.10coord: 363..381
e-value: 8.6E-20
score: 70.3
coord: 473..513
e-value: 8.6E-20
score: 70.3
IPR008336DNA topoisomerase I, DNA binding, eukaryotic-typePFAMPF02919Topoisom_I_Ncoord: 365..514
e-value: 2.5E-57
score: 193.4
IPR008336DNA topoisomerase I, DNA binding, eukaryotic-typeSUPERFAMILY56741Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragmentcoord: 350..514
IPR014711DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-typeGENE3D3.90.15.10coord: 536..679
e-value: 9.6E-61
score: 203.4
IPR025834Topoisomerase I C-terminal domainPFAMPF14370Topo_C_assoccoord: 796..865
e-value: 1.2E-30
score: 104.8
IPR014727DNA topoisomerase I, catalytic core, alpha/beta subdomainGENE3D1.10.132.10coord: 687..865
e-value: 2.9E-71
score: 238.4
IPR013034DNA topoisomerase I, domain 1GENE3D1.10.10.41coord: 382..467
e-value: 8.2E-32
score: 108.4
IPR018521DNA topoisomerase I, active sitePROSITEPS00176TOPOISOMERASE_I_EUKcoord: 810..828
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 540..740
coord: 812..862

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000293 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000293EMLSAT00000000293-696140Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000293 ID=EMLSAP00000000293|Name=EMLSAP00000000293|organism=Lepeophtheirus salmonis|type=polypeptide|length=865bp
MGENGTMLHHGSSGLNGEAFTNGSTETKASDHRHSSSKHKHKDKERRKET
EEERRVRKEQERKEREDRHKREGRREETEEERRARKEKERREREERHKRE
GRRDETEEERKVRKEKERKEREERHKREGRRDETEDERRLRKERERKERE
ERHKREGRREETEEERKARKEKEQRHKSKETEEERRVRKDKERAEKEARK
RKEMGYDHSMGEEVSFHNHDEEMKMEQQEQQVKDEPQYEEELHEEQDEFE
EDRYNNAKQENMEVEVKVQDDSEDDIPLAKKSKNKKRKSRDEDSEDDVPL
SKRKKPKVKKVERVEVSKKSKSSKKNHKVKHEVVSPTKSGGRKKKEDKVE
VWKWWEEEKVDDGTKWKFLQHRGPLFAPDYDRLPKGVHFYYNDKKMKLSS
ETEEVAGFYARXIEHEYTEKEVFNRNFFKDWRKVMTREERDIITNLSKCD
FREINTYYKKVSEERKNRSKEEKKAEKEKNAAIQDEFGICVIDNHNEKIG
NFRIEPPGLFRGRYLVGFMDRKYSKSNQIRHVKSFLKIKRGKGYYEKARE
LKSKIEKIRDDYTVDFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQAD
TVGCCSLRVEHITLHTVKDGKDYCVEFDFLGKDSIRYHNIVPVEKRVFKN
VQLFMENKRGEDDLFDRLNTTILNEYLNSLMKGLTAKVFRTFNASFTLQD
QLEELTEADDNVPAKMLSYNRANRKVAILCNHQRAAPKTHDKSMQNLQDK
IKAKREAXEKAEKDLKQAKKAYKNGGSTSEKVVMDKKKKALERTVEQLDK
LETQAVDKEENKTIALGTSKLNYLDPRISVAWSKKFDVPIEKVYNKTQRD
KFRWAIEMAGADYVF
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