EMLSAP00000000621, EMLSAP00000000621 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000621
Unique NameEMLSAP00000000621
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length771
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40coord: 676..719
e-value: 28.0
score: 7.9
coord: 324..365
e-value: 0.0011
score: 28.2
coord: 722..761
e-value: 3.8E-4
score: 29.8
coord: 417..460
e-value: 5.2
score: 12.5
coord: 368..408
e-value: 3.1E-5
score: 33.4
coord: 281..320
e-value: 2.9E-8
score: 43.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 370..408
e-value: 0.0011
score: 18.6
coord: 729..760
e-value: 6.3E-5
score: 22.5
coord: 328..365
e-value: 1.1E-4
score: 21.8
coord: 287..320
e-value: 1.5E-8
score: 34.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 375..410
score: 8.971
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 288..320
score: 14.051
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 729..760
score: 9.506
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 331..374
score: 10.074
IPR011990Tetratricopeptide-like helicalGENE3D1.25.40.10coord: 519..624
e-value: 2.6E-22
score: 78.6
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 281..478
e-value: 5.0E-51
score: 172.9
coord: 625..631
e-value: 5.0E-51
score: 172.9
coord: 677..762
e-value: 5.0E-51
score: 172.9
NoneNo IPR availablePFAMPF13414TPR_11coord: 522..588
e-value: 4.8E-10
score: 38.8
NoneNo IPR availableGENE3D3.40.50.1010coord: 25..155
e-value: 4.3E-12
score: 45.4
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 247..762
NoneNo IPR availablePANTHERPTHR15574:SF6WD AND TETRATRICOPEPTIDE REPEAT PROTEIN 1coord: 247..762
NoneNo IPR availableSUPERFAMILY48452TPR-likecoord: 521..629
NoneNo IPR availableSUPERFAMILY88723PIN domain-likecoord: 25..155
IPR006984rRNA-processing protein Fcf1/Utp23PFAMPF04900Fcf1coord: 54..155
e-value: 1.1E-22
score: 79.9
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 521..624
score: 8.519
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 288..417
score: 25.365
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 686..771
score: 10.469
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 683..760
coord: 281..510

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000621 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000621EMLSAT00000000621-696468Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000621 ID=EMLSAP00000000621|Name=EMLSAP00000000621|organism=Lepeophtheirus salmonis|type=polypeptide|length=771bp
MKVKRQRRVRRILNYFRTHFGLKAPYRVLLDGTFCQSCLTAKVNIKEQIP
NYLLVPEVRYCTSPCAITETDKLGPQLYGASLILKGLAASYLLECSHGKE
PLPAVKCIKSILKDNNSSSSIIVATQDPELRERVRKIPGVPLIYLHGNAP
TLEEPSAYTKSFVTKGKNEVSHEEKVILELKEKEFGSQESVIHKKKKRKG
VNPLSCLKSKKKTPVTPVKTIKKKRRTELYCHSFVSHSCGRMRVARRNNN
MINSLLEREYALQSPEEFVRQNQITDCSIKRLGQFHLLEGHRGCVNCIQW
NSTGEILASGSDDLNVIIWDPERGVKKTSFLTEHNGNIFSVKFLPFSGDR
ILATGAGDNHINVFDIDKSKTLHNFSNHSRRVKRLEVIPDSPDTFLSASE
DGTVMLFDIRAPVKPHQSNIIVNLKSSIGRKAEAKCLAINPVLPELLAVG
ANDPFVRVYDRRMIKPQVIEFPSSVSRDRLHYLNKSVPNTAVKEGCVQYY
SPGSNLENKASSTALILTDEIDKLKSAANIEFQNQNYVKAIKIYNLALCK
HPHSVLYGNRAAAFMKRKWNGDYYAALRDCYNALKLDPNYVKAHYRLTKC
LLELSWINEARESLNSFRKNHSDHTDTLQFKNLVKAFEEATLNGKKDNET
LSVISDNSSEGGFELLEDEENLRTNASDFKKRFCGHCNTSTDIKEASFYG
QAGQFIIAGSDNRRFFCWDKKTSNVCRMMIGDESVVNCVQSHPSTSLLAT
SGLDFHVKIWAPLSEXKCNLV
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