EMLSAP00000000669, EMLSAP00000000669 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000669
Unique NameEMLSAP00000000669
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length580
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 451..463
score: 36.52
coord: 81..97
score: 52.67
coord: 106..124
score: 30.52
coord: 136..155
score: 55.34
coord: 417..439
score: 39.19
IPR012716T-complex protein 1, beta subunitTIGRFAMTIGR02341TIGR02341coord: 55..573
e-value: 5.5E-268
score: 887.6
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 50..190
e-value: 1.1E-84
score: 283.1
coord: 448..570
e-value: 1.1E-84
score: 283.1
IPR027410TCP-1-like chaperonin intermediate domainGENE3D3.30.260.10coord: 199..257
e-value: 2.7E-33
score: 113.5
coord: 418..447
e-value: 2.7E-33
score: 113.5
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 258..417
e-value: 2.0E-38
score: 131.6
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 256..422
IPR002423Chaperonin Cpn60/TCP-1PFAMPF00118Cpn60_TCP1coord: 80..569
e-value: 1.8E-129
score: 432.4
IPR002423Chaperonin Cpn60/TCP-1PANTHERPTHR11353CHAPERONINcoord: 52..571
IPR002423Chaperonin Cpn60/TCP-1SUPERFAMILY48592GroEL equatorial domain-likecoord: 449..569
coord: 62..193
NoneNo IPR availablePANTHERPTHR11353:SF43SUBFAMILY NOT NAMEDcoord: 52..571
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 201..262
coord: 415..449
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 84..96
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 136..144

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000669 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000669EMLSAT00000000669-696516Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000669 ID=EMLSAP00000000669|Name=EMLSAP00000000669|organism=Lepeophtheirus salmonis|type=polypeptide|length=580bp
GERERDRNSDRRCFSGSFWKIPIEFPSSFVLQIREEKRREEKDPSAMTSL
NPVRVLKHEADEEKAETARLSSFVGAMAIGDLVKSTLGPKGMDKILWSMG
RNEGRXEXTNXGATILKAVGVDNPAAKVLVEMSKVQDDEVGDGTTSVTVL
ASELIREAEKLVELRIHPQTIVSGWRKATQVGKSALEAAALDHGDNEVQF
RQDLFNIAKTTLSSKILSQHKDFFSEMAVDAVLRLKKSGNLDAIQIIKVP
GGTLQDSFLDEGFILSKMPGIHQPQRIENAKILIANTPMDTDKIKVFGSR
VRVETVSKVAEIELAEKEKMKDKVQLICDHGINVFINRQLIYNYPEQLFA
DKGVMAIEHADFDGIERLALVTGGEIVSTFGNPKLVKLGHCXLIEKVMIG
EENLLKFSGVPLGEACSIIIRGATEQIIGEAERSLHDALCVLTSTVKETR
TVYGGGCSEMLMAXAVMEXAAKTPGKESRAMESFAHALRQLPSIIAENGG
YDAAQLVSELRALHTEGNKEMGLNMNEGSVGNMKDLGITESFSVKHQVLV
SASEAAEMIVRXDDIIKAAPRKRDVDRGHC
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