EMLSAP00000000885, EMLSAP00000000885 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000885
Unique NameEMLSAP00000000885
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length734
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490HELICccoord: 518..602
e-value: 5.1E-21
score: 85.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 525..602
e-value: 2.7E-12
score: 46.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 491..644
score: 15.434
IPR014001Helicase, superfamily 1/2, ATP-binding domainSMARTSM00487DEXDccoord: 138..346
e-value: 7.8E-34
score: 128.4
IPR014001Helicase, superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 159..334
score: 19.613
NoneNo IPR availableGENE3D3.40.50.300coord: 140..331
e-value: 1.3E-23
score: 82.7
NoneNo IPR availableGENE3D3.40.50.300coord: 491..640
e-value: 4.7E-17
score: 61.4
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 11..730
NoneNo IPR availablePANTHERPTHR10799:SF66DNA REPAIR AND RECOMBINATION PROTEIN RAD54-RELATEDcoord: 11..730
IPR000330SNF2-relatedPFAMPF00176SNF2_Ncoord: 145..453
e-value: 8.1E-62
score: 208.5
IPR013967Rad54, N-terminalPFAMPF08658Rad54_Ncoord: 29..111
e-value: 3.2E-4
score: 20.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 388..729
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 116..384

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000885 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000885EMLSAT00000000885-696732Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000885 ID=EMLSAP00000000885|Name=EMLSAP00000000885|organism=Lepeophtheirus salmonis|type=polypeptide|length=734bp
MRRCFAPSQISKRNDSSPPQPQESSKRRKRNDSDATKTRNPLNNISNTTT
TSPSSSAHERLIRSFVNKPFKIPIANYAGSSSGRFLGIRRSGNRVALHDP
DTENALVLYTPPEISEHEKLSLGPSAELPVHVVVDPILTKVLRPHQREGV
KFMYDCVTGIRIPENYGCIMAXEMGLGKTLQCITLMWTLLKQSPECKPTI
EKAIVVCPSSLVKNWYNEISKWLGGRVQPLAMDGGSKDSIDKDLSGFINT
YGRRPVNPILIISYETFRLHSSVLQSGEVGLVLCDEGHRLKNSENLTYQS
LMGIKSKRRVLLSGTPIQNDLLEYFSLIHFVNEGLLGTAQEFRKKFENPI
LRGRDADATDDDHKKGVQKLQEMAEVVNRCIIRRTQALLSKYLPVKYEQV
ICVQLTDLQKDIYQSFCRSDTIRKNLKGSEKVGFSPLRAITSLKKLVNHP
DLIYNVCKEGHEGFEKSLXYYPANYXPNGRLXPAYSGKLSVLDCLLAFVK
NCSTDKVVLVSNYTQMLDLFERLCSLRNYGFVRLDGSMSIKKRAKVVDKF
NDPTSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWR
DGQKKECFIYRFLAVGTIEEKIFQRQAHKKALSSCVVDQEENVEKHFSVT
DLKELFKLEVESPSDTHDKFKCRRCVNGIQVKEPPDGSDCNSDLSAWHHC
TSKKGLPDMALKQSWDAGITFAFHHKSHDQIKVL
back to top
Add to Basket