EMLSAP00000000940, EMLSAP00000000940 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000940
Unique NameEMLSAP00000000940
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length738
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..169
NoneNo IPR availableCOILSCoilCoilcoord: 426..450
NoneNo IPR availablePFAMPF12848ABC_tran_2coord: 404..479
e-value: 2.3E-7
score: 30.4
NoneNo IPR availableGENE3D3.40.50.300coord: 216..303
e-value: 4.9E-5
score: 22.7
NoneNo IPR availableGENE3D3.40.50.300coord: 509..714
e-value: 3.9E-40
score: 137.3
NoneNo IPR availableGENE3D3.40.50.300coord: 304..419
e-value: 9.6E-37
score: 125.5
NoneNo IPR availablePANTHERPTHR19211:SF14ATP-BINDING CASSETTE, SUB-FAMILY F (GCN20), MEMBER 1coord: 26..728
NoneNo IPR availablePANTHERPTHR19211ATP-BINDING TRANSPORT PROTEIN-RELATEDcoord: 26..728
IPR003593AAA+ ATPase domainSMARTSM00382AAAcoord: 535..701
e-value: 6.9E-12
score: 55.5
coord: 214..417
e-value: 1.6E-7
score: 41.0
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 527..656
e-value: 3.5E-23
score: 82.2
coord: 206..365
e-value: 3.0E-19
score: 69.5
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 186..433
score: 14.953
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 510..724
score: 16.827
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 337..351
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 628..642
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 185..262
coord: 306..435
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 491..706

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000940 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000940EMLSAT00000000940-696787Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000940 ID=EMLSAP00000000940|Name=EMLSAP00000000940|organism=Lepeophtheirus salmonis|type=polypeptide|length=738bp
MGPKKNKKGGKKGADEDWGDSDKALEEKMKKLMALNDEEKPEEIGASTKG
DALKGKPGKKPTKMEGEEELSDAXAAPLEDKSSKKKSKKKDKKFDISKAM
AEAEEAENGGTVSGEKDVTPNLESVPPEEEEDEEGNDMKGKVGMSHKEKK
ELKKKKKMQEEIDRISKKGGEGHSELNENFTVAQALKTDIVIEKFSIAAK
GKDLFRDAKLQITHGRRYGLVGPNGHGKTTLLRHIGTRSLQIPPNIDVLI
CEQEVVANEMSALETVLQSDEKRTALLKECKDLEKKQENGVDVTERLNEV
YDELRAIGADQAEPKARRLLAGLGFDKEMQERSTNKFSGGWRMRVSLARA
LYIEPTLLMLDEPTNHLDLNAVIWLDNYLQNWKKTLLVVSHDQSFLDNIC
TDIIHLENCQLWYYKGNYSMFKKMVVQKRRERIKEFEKQEKRLKELKASG
QSKKKAEAKQKEALTRKQLKNQSKLTKEDDSGPTELLEKPREYLVKFRFP
ETSHLQPPFLGLYNVSFKYESQNPLFKSVDFGIDMESRIAIVGPNGVGKS
TFLKLLMGDLEPTKGEMRKNARLKIGRFDQHSGEHLTADEXPTEYIMRLF
NLPVEKARKQLGSFGLQSHAHTIKMKDLSGGQKSRVALAELTLSAPDVVI
LDEPTNNLDIESIDALGDAIREYKGGVIIVTHDERLIRDTECQLWVVEEQ
TINEIEGDFDDYRKEVLDSLGEEVNNPSLIANQAVVQS
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