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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 148..169 |
None | No IPR available | COILS | Coil | Coil | coord: 426..450 |
None | No IPR available | PFAM | PF12848 | ABC_tran_2 | coord: 404..479 e-value: 2.3E-7 score: 30.4 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 216..303 e-value: 4.9E-5 score: 22.7 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 509..714 e-value: 3.9E-40 score: 137.3 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 304..419 e-value: 9.6E-37 score: 125.5 |
None | No IPR available | PANTHER | PTHR19211:SF14 | ATP-BINDING CASSETTE, SUB-FAMILY F (GCN20), MEMBER 1 | coord: 26..728 |
None | No IPR available | PANTHER | PTHR19211 | ATP-BINDING TRANSPORT PROTEIN-RELATED | coord: 26..728 |
IPR003593 | AAA+ ATPase domain | SMART | SM00382 | AAA | coord: 535..701 e-value: 6.9E-12 score: 55.5 coord: 214..417 e-value: 1.6E-7 score: 41.0 |
IPR003439 | ABC transporter-like | PFAM | PF00005 | ABC_tran | coord: 527..656 e-value: 3.5E-23 score: 82.2 coord: 206..365 e-value: 3.0E-19 score: 69.5 |
IPR003439 | ABC transporter-like | PROSITE | PS50893 | ABC_TRANSPORTER_2 | coord: 186..433 score: 14.953 |
IPR003439 | ABC transporter-like | PROSITE | PS50893 | ABC_TRANSPORTER_2 | coord: 510..724 score: 16.827 |
IPR017871 | ABC transporter, conserved site | PROSITE | PS00211 | ABC_TRANSPORTER_1 | coord: 337..351 |
IPR017871 | ABC transporter, conserved site | PROSITE | PS00211 | ABC_TRANSPORTER_1 | coord: 628..642 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 185..262 coord: 306..435 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 491..706 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000940 ID=EMLSAP00000000940|Name=EMLSAP00000000940|organism=Lepeophtheirus salmonis|type=polypeptide|length=738bp MGPKKNKKGGKKGADEDWGDSDKALEEKMKKLMALNDEEKPEEIGASTKG DALKGKPGKKPTKMEGEEELSDAXAAPLEDKSSKKKSKKKDKKFDISKAM AEAEEAENGGTVSGEKDVTPNLESVPPEEEEDEEGNDMKGKVGMSHKEKK ELKKKKKMQEEIDRISKKGGEGHSELNENFTVAQALKTDIVIEKFSIAAK GKDLFRDAKLQITHGRRYGLVGPNGHGKTTLLRHIGTRSLQIPPNIDVLI CEQEVVANEMSALETVLQSDEKRTALLKECKDLEKKQENGVDVTERLNEV YDELRAIGADQAEPKARRLLAGLGFDKEMQERSTNKFSGGWRMRVSLARA LYIEPTLLMLDEPTNHLDLNAVIWLDNYLQNWKKTLLVVSHDQSFLDNIC TDIIHLENCQLWYYKGNYSMFKKMVVQKRRERIKEFEKQEKRLKELKASG QSKKKAEAKQKEALTRKQLKNQSKLTKEDDSGPTELLEKPREYLVKFRFP ETSHLQPPFLGLYNVSFKYESQNPLFKSVDFGIDMESRIAIVGPNGVGKS TFLKLLMGDLEPTKGEMRKNARLKIGRFDQHSGEHLTADEXPTEYIMRLF NLPVEKARKQLGSFGLQSHAHTIKMKDLSGGQKSRVALAELTLSAPDVVI LDEPTNNLDIESIDALGDAIREYKGGVIIVTHDERLIRDTECQLWVVEEQ TINEIEGDFDDYRKEVLDSLGEEVNNPSLIANQAVVQS back to top
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