EMLSAP00000001089, EMLSAP00000001089 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001089
Unique NameEMLSAP00000001089
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length599
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007199Replication factor-A protein 1, N-terminalPFAMPF04057Rep-A_Ncoord: 5..97
e-value: 8.1E-23
score: 80.0
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 2..113
e-value: 1.7E-34
score: 117.5
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 270..393
e-value: 5.3E-38
score: 129.1
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 225..257
e-value: 6.5E-4
score: 19.4
coord: 183..224
e-value: 2.1E-11
score: 43.4
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 445..590
e-value: 1.6E-45
score: 153.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 416..590
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 182..264
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 271..395
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..111
IPR013955Replication factor A, C-terminalPFAMPF08646Rep_fac-A_Ccoord: 436..584
e-value: 1.2E-43
score: 148.1
IPR004591Replication factor-a protein 1 Rpa1TIGRFAMTIGR00617TIGR00617coord: 225..590
e-value: 1.7E-128
score: 427.6
NoneNo IPR availablePANTHERPTHR23273:SF0SUBFAMILY NOT NAMEDcoord: 1..595
NoneNo IPR availablePANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 1..595

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001089 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001089EMLSAT00000001089-696936Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001089 ID=EMLSAP00000001089|Name=EMLSAP00000001089|organism=Lepeophtheirus salmonis|type=polypeptide|length=599bp
MPVKLTGGALLSICQGDRVENPVLQILGNKKINGSSSDRYRLLISDGDYS
NSFAMLATQMNDKIHNGQLENYTVVSVKKYVCNNMQGKKVIILLDIDIST
PGAEIGEKLGNPRAINPDGTVNEKPSSSGGNSSSSNQKRYGDDAGLNAPP
SKKTPLAPQXPPRSSILXPRPVIGSSXXPSTNIMPINSLTPYQNKWTIQG
RVTNKSDIRRWSNSRGEGHLFSFDVYYISQGVLKAANKQFNNTNNDYEIT
LKDTSEVSLCTDADKDVPTISFDFVKIADLAKCAKDSIVDIIGIVKVCNE
SVQFTSQRTQKEMRKRDLTFVDXSLTEXNVTVWGTMADTFEGSNFPVVAI
KGAKVSDYNGXSLSTLISSTVQMNPDIPQAHKLKGWFESEGSNIETTSLT
QSQLGRSNNMDSGSEGKTIGEVKYDNLGSSTEKPDYYSTQALISMFQKDK
ALYQACNRVSEGRACNKKVVDNNGSYRCEKCNMDNDEFNWRIILNLLIVD
STDSQWVNCFQESAESILGVSAQDLGHSFQHDEEKYNQIFKEANFKTYNF
RIRCKADNYNGESKSRHTIMSLSPVNYEENNNKLIQELKQEGCSSINHL
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