EMLSAP00000001546, EMLSAP00000001546 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001546
Unique NameEMLSAP00000001546
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length566
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452Src homology-3 domainPRINTSPR00452SH3DOMAINcoord: 526..541
score: 32.83
coord: 554..566
score: 40.14
coord: 512..522
score: 37.42
coord: 543..552
score: 33.81
IPR001452Src homology-3 domainSMARTSM00326SH3coord: 512..566
e-value: 2.3E-18
score: 77.0
IPR001452Src homology-3 domainPFAMPF00018SH3_1coord: 516..560
e-value: 1.3E-14
score: 53.1
IPR001452Src homology-3 domainPROSITEPS50002SH3coord: 516..566
score: 16.299
IPR001452Src homology-3 domainSUPERFAMILY50044SH3-domaincoord: 510..565
NoneNo IPR availablePRINTSPR00499P67PHOXcoord: 534..550
score: 38.24
coord: 550..563
score: 48.21
coord: 514..534
score: 30.95
NoneNo IPR availableGENE3D2.30.30.40coord: 489..565
e-value: 1.8E-20
score: 72.1
NoneNo IPR availablePANTHERPTHR14167SH3 DOMAIN-CONTAININGcoord: 67..564
NoneNo IPR availablePANTHERPTHR14167:SF13PUTATIVE UNCHARACTERIZED PROTEINcoord: 67..564
NoneNo IPR availableSUPERFAMILY103657BAR/IMD domain-likecoord: 132..386
IPR001060FCH domainSMARTSM00055FCHcoord: 122..213
e-value: 7.6E-6
score: 35.4
IPR001060FCH domainPFAMPF00611FCHcoord: 126..212
e-value: 6.8E-12
score: 45.3
IPR001060FCH domainPROSITEPS50133FCHcoord: 118..184
score: 10.074

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001546 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001546EMLSAT00000001546-697393Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001546 ID=EMLSAP00000001546|Name=EMLSAP00000001546|organism=Lepeophtheirus salmonis|type=polypeptide|length=566bp
MKRNRKDEGSDMNFSVLGIYKEKKDPMWMDGSKYYFSDESHVYGGSLGSG
GLSMRRSFSLPRWMDQIVHGRMTSTQLSNMVNKPLRRSSLALHRMNSKIK
NGGSSSSSSGVSSSSGSSSYASHRSSNNEAAFEEIRTYIKSGSEFTKDLH
HILQERSEAENAYAKSLSKLSAKLLKSTRDLGHSSSSVINAWHFIAEDME
FTADIHKSIASILIEECVKPLKTFSDIQHKSRKSIESLVDKRAKLYSETR
TLETKYKVKSYSACRDNERVQDQALDCKLGRGKALSEKELSKLHLKRQKA
EESARKCDGDYYTSCLKAERSRLDWESGIIRGCSIFRQMEENRLVQLQAL
SETYQSALSENLPKLVSASKRLQEPIRSSDVERDMDASKAKFELDGNVRC
GDSILPDTYAEDATNAMNQERRRQAINEILKRVDMDIEKEKKGRSGVENL
AKALTETPKFGGEDSLVDIQEKISHMSSMISYLEACKFKTTNSLNYVDGK
TMIKQVSSSTMGQCSAIYDYQANLHDELTIFAGDIITIHDKQNDDWWLGE
VRGAVGLFPSTYVEIK
back to top
Add to Basket