EMLSAP00000001682, EMLSAP00000001682 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001682
Unique NameEMLSAP00000001682
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1470
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPRINTSPR00261LDLRECEPTORcoord: 920..941
score: 42.79
coord: 1073..1094
score: 51.88
coord: 793..814
score: 45.12
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLacoord: 1061..1101
e-value: 7.1E-12
score: 55.5
coord: 781..821
e-value: 8.1E-11
score: 51.9
coord: 909..946
e-value: 1.3E-4
score: 31.3
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 910..946
e-value: 3.3E-8
score: 32.9
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 1058..1100
e-value: 5.0E-12
score: 44.9
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 779..815
e-value: 2.5E-12
score: 46.3
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPFAMPF00057Ldl_recept_acoord: 910..944
e-value: 8.4E-6
score: 25.4
coord: 1061..1099
e-value: 4.2E-11
score: 42.4
coord: 781..815
e-value: 4.3E-9
score: 36.0
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 1061..1100
score: 13.125
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 909..945
score: 12.412
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 781..820
score: 12.337
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 781..820
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 909..945
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 1061..1098
NoneNo IPR availablePRINTSPR00018KRINGLEcoord: 689..704
score: 36.91
coord: 705..717
score: 40.35
coord: 732..752
score: 45.82
coord: 754..765
score: 35.38
NoneNo IPR availableGENE3D2.40.10.10coord: 1288..1468
e-value: 2.4E-46
score: 157.5
NoneNo IPR availableGENE3D2.40.10.10coord: 1246..1287
e-value: 1.4E-7
score: 30.7
NoneNo IPR availableGENE3D3.50.4.10coord: 826..903
e-value: 3.4E-12
score: 45.6
NoneNo IPR availableGENE3D3.10.250.10coord: 949..1056
e-value: 2.2E-24
score: 85.1
coord: 409..515
e-value: 5.3E-18
score: 64.6
coord: 1102..1206
e-value: 8.4E-31
score: 105.7
NoneNo IPR availablePANTHERPTHR24258FAMILY NOT NAMEDcoord: 297..1468
NoneNo IPR availablePANTHERPTHR24258:SF4SUBFAMILY NOT NAMEDcoord: 297..1468
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 827..904
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR001190SRCR domainPRINTSPR00258SPERACTRCPTRcoord: 1124..1135
score: 63.68
coord: 1139..1149
score: 49.74
coord: 1171..1185
score: 39.87
coord: 1105..1121
score: 53.39
IPR001190SRCR domainPFAMPF00530SRCRcoord: 1108..1206
e-value: 4.2E-26
score: 91.0
coord: 960..1056
e-value: 1.0E-20
score: 73.7
coord: 415..515
e-value: 1.8E-17
score: 63.3
IPR001190SRCR domainPROSITEPS00420SRCR_1coord: 1110..1147
IPR001190SRCR domainPROSITEPS50287SRCR_2coord: 952..1056
score: 23.48
IPR001190SRCR domainPROSITEPS50287SRCR_2coord: 1105..1207
score: 28.744
IPR001190SRCR domainPROSITEPS50287SRCR_2coord: 411..516
score: 20.871
IPR017448Speract/scavenger receptor-relatedSMARTSM00202SRcoord: 952..1056
e-value: 4.2E-28
score: 109.3
coord: 1105..1207
e-value: 1.4E-39
score: 147.5
coord: 411..516
e-value: 2.4E-17
score: 73.6
IPR017448Speract/scavenger receptor-relatedSUPERFAMILY56487SRCR-likecoord: 949..1055
IPR017448Speract/scavenger receptor-relatedSUPERFAMILY56487SRCR-likecoord: 1100..1208
IPR017448Speract/scavenger receptor-relatedSUPERFAMILY56487SRCR-likecoord: 410..517
IPR003609Apple-likeSMARTSM00473PAN_APcoord: 826..904
e-value: 5.3E-8
score: 42.6
IPR003609Apple-likePROSITEPS50948PANcoord: 819..905
score: 9.398
IPR002557Chitin binding domainSMARTSM00494ChtBD2coord: 125..185
e-value: 6.5E-7
score: 39.0
coord: 289..344
e-value: 9.9E-11
score: 51.7
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 129..175
e-value: 4.8E-7
score: 29.5
coord: 291..342
e-value: 1.4E-9
score: 37.6
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 285..345
e-value: 1.2E-14
score: 53.3
coord: 124..184
e-value: 1.2E-10
score: 40.4
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 124..185
score: 9.537
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 288..344
score: 12.594
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 122..176
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 286..345
IPR000001KringleSMARTSM00130KRcoord: 687..767
e-value: 1.7E-22
score: 90.7
IPR000001KringlePFAMPF00051Kringlecoord: 689..765
e-value: 3.5E-17
score: 62.1
IPR000001KringleGENE3D2.40.20.10coord: 682..770
e-value: 1.3E-18
score: 66.8
IPR000001KringlePROSITEPS50070KRINGLE_2coord: 688..765
score: 17.583
IPR001304C-type lectinSMARTSM00034CLECTcoord: 523..681
e-value: 7.0E-9
score: 45.5
IPR001304C-type lectinPROSITEPS50041C_TYPE_LECTIN_2coord: 531..620
score: 10.893
IPR001254Peptidase S1SMARTSM00020Tryp_SPccoord: 1246..1464
e-value: 2.1E-68
score: 243.3
IPR001254Peptidase S1PFAMPF00089Trypsincoord: 1248..1464
e-value: 1.1E-47
score: 162.3
IPR001254Peptidase S1PROSITEPS50240TRYPSIN_DOMcoord: 1247..1469
score: 29.712
IPR016186C-type lectin-likeGENE3D3.10.100.10coord: 521..681
e-value: 1.3E-14
score: 53.8
IPR003014PAN-1 domainPFAMPF00024PAN_1coord: 831..903
e-value: 1.1E-10
score: 41.0
IPR018056Kringle, conserved sitePROSITEPS00021KRINGLE_1coord: 738..750
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 1075..1099
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 795..819
IPR009003Trypsin-like cysteine/serine peptidase domainSUPERFAMILY50494Trypsin-like serine proteasescoord: 1239..1468
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 687..769
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 664..681
coord: 527..622

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001682 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001682EMLSAT00000001682-697529Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001682 ID=EMLSAP00000001682|Name=EMLSAP00000001682|organism=Lepeophtheirus salmonis|type=polypeptide|length=1470bp
MSINMFKCTQSSLLIFKQLFYLFIISSVILQTLGVVTKIRYGNRERKIKE
TFRLNDKVYKAPFSSSSLTPRAGFGYSSAEPYENETPADEGANRNIKTYS
VLRKSSSPSREKVSKKKXFSSEPVDYCLKSRGQFAYPMDCSSYVNCWDST
AFIQQCFPKYLIFNPITRRCDFSSNVPRSARNCGKRFIQTEDISSSTLTD
NHLSSSRTVPEEPNSKFCTDFEHIGLECVPQEYCHNGIIVKESQGTSHTA
NRIFYGGEPELKICNGHGDICCKNANFRKGRSPDKAQPSLCPSDYTGSIS
YENDCRKFINCWKGISKVQSCAPGTLYNSASGICDFPSKSDCGTPASLIK
NSLDYDYEDEFDYSGIITPRFFLENEENTDYDDNDEDEEEEISRSGGNKV
LPAPPTSGQTIRLRGGKAPYTGYLEMFRNDKWGFVCDEGSWTIQEANLVC
KQLGFVRGLRKTTQVSRIXEERKMTEXVECSGGETSLDKCKIRYSTPGNR
YGSCKPSSNIVSITCVHDSLASCKTEGEVPWGESCYSVHTKEANFHEAQS
ICKGEGKTLLEITSQRENDLVSELLLHNKLSSDLLGEVWTGGLASKTKRS
ASYIWHGSSTFILFQNWWPGWDGRRTASSKNLYRANAKGIKFSRKFPFIE
SSLRRRRDLRLTDYYFWTLEDFSIKLPFICESKKNDIGCIIGNGDSYEGS
ATRGESGVTCLPWKSPFLTTILDKENINKLGPLQDNNFCRNPDGDIGPWC
IAPNGEFDYCDIPTCPENAEIHSDQKIIKHRCPPGHFQCQSGAQCILKEY
VCDGHEDCINGADEKEIVCSENIAFKALEDFNKYSKNRLYVAYTERWLDV
NVEACARHCLEAGDFVCRSFNYHHDKRLCTLNEEDIGSMGMKREDPEWDY
YQNINTGNFCENEELTCPSGKCLKENEICDGKSDCSDNYDERDCSDKPNV
EIRLIGGKAGPHEGRIEIKAFDYPFGGICDDGFNIGEANVVCKSLGYSLG
ASEANLNSFFGYSDGKQILMDELHCIGNETSILNCKFDPWTQHDCSNKEW
AGVRCKISQKECEPEEWRCNDSQECIPLDLLCDGEPDCVDGSDESLKQCK
TPIELRLVNGNNMTSGRVEVLFKGVWGTVCDDNFGEAEGGVVCRNLGFKN
HEALIHGQAAFEAGEGPIWIESIQCEGTESSLKECHSSSWSPSYRCKHME
DVGLECIPKEDSDKGIDRTRFDPFFKVECGKSLIKDSDLPSEPIARVAGG
RQSKPGYQPWVASVRVQGSSNSYHWCGAVILSEFHVLTVPDVQEQEFSIE
DVHFHEEYNMNKYLNNDIALIRIKPNRDESGIKFGSRVVPICLPTKNVVY
SPNLECIISGWGSTSISELGFTRFLKVAKIPYLETSKCINPRVYGEKKLS
NGMFCAGFLDGGVDSCQGDSGGGLICKTGENSSXLLGLTSWGYGCGRPNR
PGVYTKVVNYLDWIQERMTL
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