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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000873 | AMP-dependent synthetase/ligase | PFAM | PF00501 | AMP-binding | coord: 68..482 e-value: 4.6E-92 score: 308.4 |
None | No IPR available | GENE3D | 3.30.300.30 | | coord: 478..577 e-value: 1.2E-25 score: 89.5 |
None | No IPR available | GENE3D | 2.30.38.10 | | coord: 397..472 e-value: 2.9E-25 score: 87.5 |
None | No IPR available | GENE3D | 3.40.50.980 | | coord: 64..175 e-value: 1.1E-32 score: 111.7 coord: 213..237 e-value: 1.1E-32 score: 111.7 |
None | No IPR available | GENE3D | 3.40.50.980 | | coord: 238..395 e-value: 8.1E-39 score: 132.3 |
None | No IPR available | PANTHER | PTHR24096:SF16 | SUBFAMILY NOT NAMED | coord: 46..574 |
None | No IPR available | PANTHER | PTHR24096 | FAMILY NOT NAMED | coord: 46..574 |
None | No IPR available | SUPERFAMILY | 56801 | Acetyl-CoA synthetase-like | coord: 51..576 |
IPR025110 | AMP-binding enzyme C-terminal domain | PFAM | PF13193 | AMP-binding_C | coord: 490..565 e-value: 7.7E-12 score: 45.8 |
IPR020845 | AMP-binding, conserved site | PROSITE | PS00455 | AMP_BINDING | coord: 228..239 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000001709 ID=EMLSAP00000001709|Name=EMLSAP00000001709|organism=Lepeophtheirus salmonis|type=polypeptide|length=582bp MGLMQRAFLGHIRHIRRLRXSCSYLKAKQSXSHFGAPLIKPGEEKLIQYS PYEEVVLPSIPYADFIWENLEDYKEREALVCGMTGRTYTYEMVHSLSQKF GSALLRLGAKKGDVMGLVVPNIPEFVIAFMGCASIGVTLTTMNPTYRPEE IARQLDNSGAKYVMTIGLFLQNIKQSCEIYSGIQKIIVIGMEETPSDCKS FMEMAIFDDGSFFDQRETIDPHKDILALPYSSGTTGPPKGVALTHSNLVN NITQLSHPSIHNFIGDEVEQHISIAVLPFFHIFAMTCSLSAGLRFGVKLI TLPKFEPEMFINSLVQYKPTHMLVVPPLVSFMTSSPLIKPSLLSSIKMLN GGASTFGPTLIEKFMNKCDSDLRFQEGYGMTECSPVTHVQPKDGIIYGSC GNLIPNTIGKIIDIDTGKVLGPGENGELCVSGPQIMQGYYKNKKATDKII QNGWXHTGDIAYYNQDGQFYIVDRLKELIKVKGLQVAPSELEDLIRKYPG VDDVAXVGVPDERNGELPRAYVVRKNRSVMEQGIIDFVTEKVAPHKKLGA GVMFVDTLPKNQTGKILRRELKAQVFKGSFGY back to top
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