EMLSAP00000001761, EMLSAP00000001761 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001761
Unique NameEMLSAP00000001761
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1788
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006605G2 nidogen/fibulin G2FSMARTSM00682G2Fcoord: 165..384
e-value: 2.2E-18
score: 77.1
IPR006605G2 nidogen/fibulin G2FPFAMPF07474G2Fcoord: 221..343
e-value: 6.9E-28
score: 97.2
IPR006605G2 nidogen/fibulin G2FPROSITEPS50993NIDOGEN_G2coord: 157..385
score: 29.103
IPR003886Nidogen, extracellular domainSMARTSM00539NIDOcoord: 54..206
e-value: 1.4E-25
score: 100.9
IPR003886Nidogen, extracellular domainPFAMPF06119NIDOcoord: 119..202
e-value: 4.0E-21
score: 75.3
IPR003886Nidogen, extracellular domainPROSITEPS51220NIDOcoord: 54..204
score: 25.497
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 424..462
e-value: 0.25
score: 20.4
coord: 466..502
e-value: 29.0
score: 10.8
coord: 1160..1196
e-value: 0.019
score: 24.2
coord: 1494..1533
e-value: 0.022
score: 23.9
coord: 1288..1327
e-value: 19.0
score: 12.7
coord: 385..420
e-value: 38.0
score: 9.3
coord: 1396..1435
e-value: 22.0
score: 12.1
coord: 1116..1155
e-value: 0.18
score: 20.9
coord: 1441..1478
e-value: 0.07
score: 22.3
coord: 1072..1110
e-value: 0.46
score: 19.5
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1491..1533
score: 10.439
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1157..1196
score: 11.397
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1438..1478
score: 8.421
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1113..1155
score: 12.32
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 382..420
score: 7.57
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1393..1429
score: 7.833
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1069..1108
score: 9.583
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 421..462
score: 12.671
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 463..502
score: 8.6
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1285..1325
score: 6.994
IPR001881EGF-like calcium-binding domainSMARTSM00179EGF_CAcoord: 421..468
e-value: 2.2E-7
score: 40.6
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 421..457
e-value: 3.6E-7
score: 29.9
IPR000033LDLR class B repeatSMARTSM00135LYcoord: 1748..1788
e-value: 100.0
score: 1.6
coord: 1565..1607
e-value: 3.3E-7
score: 39.9
coord: 1608..1650
e-value: 1.2E-10
score: 51.4
coord: 1651..1695
e-value: 2.0E-10
score: 50.6
coord: 1696..1744
e-value: 0.017
score: 24.3
IPR000033LDLR class B repeatPFAMPF00058Ldl_recept_bcoord: 1675..1711
e-value: 1.7E-7
score: 31.2
coord: 1628..1668
e-value: 2.4E-11
score: 43.6
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 1766..1788
score: 7.766
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 1671..1715
score: 14.542
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 1628..1670
score: 14.472
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 1585..1627
score: 14.774
NoneNo IPR availableGENE3D2.60.40.1530coord: 511..640
e-value: 8.2E-17
score: 60.9
coord: 977..1043
e-value: 8.2E-17
score: 60.9
NoneNo IPR availableGENE3D2.10.25.10coord: 1397..1475
e-value: 7.1E-4
score: 19.2
coord: 384..458
e-value: 6.8E-10
score: 38.5
NoneNo IPR availablePANTHERPTHR10529:SF4NIDOGENcoord: 25..1783
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 25..1783
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1071..1111
NoneNo IPR availableSUPERFAMILY63825YWTD domaincoord: 1567..1784
NoneNo IPR availableSUPERFAMILY69179Integrin domainscoord: 970..1041
coord: 506..611
IPR023413Green fluorescent protein-likeGENE3D2.40.155.10coord: 1167..1207
e-value: 1.1E-5
score: 24.8
coord: 472..510
e-value: 3.1E-4
score: 20.1
coord: 1502..1540
e-value: 1.8E-7
score: 30.7
coord: 1078..1115
e-value: 3.6E-4
score: 19.9
coord: 221..377
e-value: 1.1E-33
score: 116.7
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 1542..1784
e-value: 2.9E-62
score: 209.8
IPR013649Integrin alpha-2PFAMPF08441Integrin_alpha2coord: 506..612
e-value: 2.2E-13
score: 49.7
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1096..1109
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1464..1477
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1182..1195
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 488..501
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1260..1275
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 448..461
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 406..419
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1224..1237
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1141..1154
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 439..450
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 421..448
IPR009017Green fluorescent proteinSUPERFAMILY54511GFP-likecoord: 221..377
IPR009030Insulin-like growth factor binding protein, N-terminalSUPERFAMILY57184Growth factor receptor domaincoord: 384..507

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001761 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001761EMLSAT00000001761-697608Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001761 ID=EMLSAP00000001761|Name=EMLSAP00000001761|organism=Lepeophtheirus salmonis|type=polypeptide|length=1788bp
MSGKWGKSGALAKKAKYQVLQGNKVNENGLVSFLTEIPVFFNLQFPMEYP
LIAALYSDVDTRAPNGGTVWFRKTHEQRLLDDIGGRISIKFGGAFRPREL
FVTTWDHVGCFDSQSDELNTYQIVIASDENDSYVLLLYPENGIQWVKGKG
KTQGVPDATAQAGIISGEGQYVEMPFSGKDQVRHMAKWSNVNKPGVFMYK
TGRLEPSQPAVLPNVAEYNPGWLFAQSINGAPNGFTFTGGVFNYTAKVTF
PNTNHEVTVSFNFKGLDVFDYINADVHIEGGLPRLGPKGIKIVIEDFDEK
FTKERPGLFTSSSKRKIILESGNRQIIPMNVEQRITFEECDGNSGIREIK
LHSGRNFVVFDEAEGIVRFALTNKVTPFEAQGDDSCMEVDCGINGKCEVQ
GSIGVCICNSGYEFHENQCIDINECLREGMSNCSPFAECINDPGSYGCLC
KSGYLGNGELCFLETSCEELNCGPNSECITDDYGIPKCSCLNGFNGNGSY
CYSVPSEVELRGYANPETIALNLVDGSRDINVMEDIGPPIHHFYEILNHG
PYTIGDLKLRITWPLRDLNGRYILYIPSAPFIKYSNQGDNFIEQCQVDSS
IVNPEGYQSAKRVKRQDDQSMYDDYNDLDKLGMLNYEQDYSELDDYDYSH
FDTYNKDPYVLSPSNEQDFQNYDDNDSLEYNDYTDQEDHGHAKINNNNNQ
DDHYRDSYNSGASLSSEQDPFYHDEESRYSMHNDPNAQHPDQDQRYPYGP
TENQNLDTSDQDTRYSYGEINNPNMYPPRQPGQDYRYGEHGERNPSKHXS
YDRNSDSPSSRREQNSRYGDNGEINNQNVHPSEBDSNDPNHDPYAQRHXQ
DPRYDPRYGEHGZXXNXNXYSSEHDSNDRNHDPYARXPEQDPRYRDHQES
NSQNVHSSEHDSQDQNNDPYNRRPDQDPRYSPSQMNNQNSHSSINDPRYS
HGPRNNVNTDASAQDPRYNHQSQYNEPNINSEDESSRRQGGPGQVSFICN
INLAVNEIASLTVKSYLDLKTLSDHYPEVTQFVFPSEGEVVLEHNVKSKG
SNIVNLLTTGVPRVKVDSEDAICGELQCHKNADCYQTFRGDEAAQCRCKP
GFKGDGFNCIDSGQKDCRIDPEICHDFGRCEYDMENEFYHCQCLQGYEGN
GTHCERVKGSCQILNDCSKHGNCALEGSDFVCRCLEGYQGDGYNCERISN
ESWVDVSTSNQKPSEVPTCMFETCSCYSGYIFEGSRCIIDESRRTFRVPV
AHGYCFGNNCECPRGYKYDKYDEICKLEEINFPSADVFCDDNGIQCSQDA
NCIYDRSYDHSLCVCNDNYIGDGFECELSPVTILEGKCSKDSDCSLDMKC
VIVMEEFNYKYMCIDEKPNEELDSYTLASETTVAXEXEEXXANKXLCSSH
LDCHADADCIYNTEHQRYQCECFQFYEGDGKYECFPSPDAGCDILENCDS
KNGVCSYEDEKFVCRCKPGFHGDGITCREDGFRGDGFVCNITSSCSEIPS
ICHARAECVKNTYNEEYHCECDDNFIGDGLHCEVIPEHDGNFIFMAHGMA
LIKVPFSASKSNPAMPIFIGAGEMATGIDVDCITGKVYWTDTVGKRIRRS
NYDGTQVETFLEGEMEFPIGIAIDFKSRNLYWTDSGKRSINIANMDTKNR
RILIEEFLKNPRGIALHPTIGVLLWTDWDRKHPKIELSNMDGTDRRTLVD
TDLGMPNSITVNYEEYKFCWTDGGSTFPPISPKIECLGIHGGGSREVLTS
LNSEKDLPYGICHNKDDIYWTDWKQPLIQTINSKNLSM
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