EMLSAP00000002216, EMLSAP00000002216 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000002216
Unique NameEMLSAP00000002216
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length500
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 60..79
score: 50.76
coord: 30..48
score: 41.48
coord: 346..368
score: 37.2
coord: 8..24
score: 38.1
coord: 380..392
score: 45.77
IPR002423Chaperonin Cpn60/TCP-1PFAMPF00118Cpn60_TCP1coord: 6..495
e-value: 1.2E-141
score: 472.5
IPR002423Chaperonin Cpn60/TCP-1PANTHERPTHR11353CHAPERONINcoord: 1..499
IPR002423Chaperonin Cpn60/TCP-1SUPERFAMILY48592GroEL equatorial domain-likecoord: 378..495
coord: 1..117
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 185..346
e-value: 3.1E-57
score: 192.9
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 183..351
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 1..114
e-value: 6.0E-80
score: 267.6
coord: 377..495
e-value: 6.0E-80
score: 267.6
IPR012718T-complex protein 1, epsilon subunitTIGRFAMTIGR02343TIGR02343coord: 1..498
e-value: 3.4E-263
score: 871.9
IPR027410TCP-1-like chaperonin intermediate domainGENE3D3.30.260.10coord: 347..376
e-value: 9.3E-35
score: 118.2
coord: 122..184
e-value: 9.3E-35
score: 118.2
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 60..68
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 11..23
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00751TCP1_2coord: 32..48
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 342..377
coord: 120..187

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000002216 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000002216EMLSAT00000002216-698063Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000002216 ID=EMLSAP00000002216|Name=EMLSAP00000002216|organism=Lepeophtheirus salmonis|type=polypeptide|length=500bp
MAARTVASTLRTSLGPKGLDKLMVSSDSDVTITNDGATILKMMDVDHQVA
KLMVQLSQSQDDEIGDGTTGVVVLCGALLEQSEFLIDKGIHPIRIADGFE
LAXKAAXDHLDAIAEKFEINPEDPENLIRTAMTTLGSKIINKCHRQMAKI
AVDAVLTVADLDRHDVNFELIKVEAKVGGRMEDSMLVKGVVVDKDFSHPQ
MPKVLKDAKLAILTCPFEPPKPKTKHKLDVTSVEDYKKLRQYEIEKFDEM
VKQVKDAGATLAICQWGFDDEANHLLLQRELPAVRWVGGPEIELIAIATG
GRXVXRFXDLTAEKLGFAGCVRELNFGTTKEKMLVIEECKNSKAVTIFLR
GGTKMIIDEAKRSIHDALCVVRNLVRDSRVVYGGGAAEISCSVAVGKAAD
KIKTIEQYAFRAFAEALESIPIALAENCGMDPIVTLTEVKSKQITDNNPA
LGINCMDAVSNDMKEQHVIETVHSKKSQILLATQLVKMILKIDDIRSPEN
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