EMLSAP00000002944, EMLSAP00000002944 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000002944
Unique NameEMLSAP00000002944
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length208
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006029Neurotransmitter-gated ion-channel transmembrane domainPFAMPF02932Neur_chan_membcoord: 36..173
e-value: 3.1E-11
score: 43.4
IPR006029Neurotransmitter-gated ion-channel transmembrane domainSUPERFAMILY90112Neurotransmitter-gated ion-channel transmembrane porecoord: 40..184
IPR027361Nicotinic acetylcholine-gated receptor, transmembrane domainGENE3D1.20.120.370coord: 136..184
e-value: 2.5E-13
score: 49.3
IPR006201Neurotransmitter-gated ion-channelPANTHERPTHR18945NEUROTRANSMITTER GATED ION CHANNELcoord: 142..174
NoneNo IPR availablePANTHERPTHR18945:SF88ACETYLCHOLINE RECEPTOR PROTEIN ALPHA, INVERTEBRATEcoord: 142..174
NoneNo IPR availableTMHMMTMhelixcoord: 157..179

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000002944 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000002944EMLSAT00000002944-698791Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000002944 ID=EMLSAP00000002944|Name=EMLSAP00000002944|organism=Lepeophtheirus salmonis|type=polypeptide|length=208bp
MKNPRYTFMTPDNEYLDEHQVAELLNSSDMQDYLHQQRQYQKMSSNRQYH
HHYQTSKQNLVPNNTRMNNSSLHNRNYSRYGNHQLSRKGEGMTSPPQTHN
RILVRTCNGLELRDPPYIPNSSGGGGGYLTTTTTNNAINRGNVIEDWKYV
AMVLDRLFLWIFTVAVLVGTAGIILQAPTLYDDRQPLDIRLSQIGLATAR
PMAGVNKD
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