EMLSAP00000003069, EMLSAP00000003069 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003069
Unique NameEMLSAP00000003069
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length509
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..178
NoneNo IPR availablePFAMPF13371TPR_9coord: 298..348
e-value: 1.5
score: 8.5
NoneNo IPR availablePFAMPF14559TPR_19coord: 187..238
e-value: 1.4E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR23083TETRATRICOPEPTIDE REPEAT PROTEIN, TPRcoord: 26..416
NoneNo IPR availableSUPERFAMILY48452TPR-likecoord: 81..144
coord: 175..383
IPR019734Tetratricopeptide repeatSMARTSM00028TPRcoord: 109..142
e-value: 320.0
score: 1.8
coord: 347..380
e-value: 3.4
score: 16.6
coord: 144..177
e-value: 37.0
score: 10.0
coord: 313..346
e-value: 12.0
score: 14.3
coord: 211..244
e-value: 13.0
score: 14.0
coord: 75..108
e-value: 23.0
score: 11.7
coord: 245..278
e-value: 250.0
score: 2.6
coord: 279..312
e-value: 22.0
score: 12.0
coord: 178..210
e-value: 150.0
score: 4.5
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 352..378
e-value: 0.25
score: 11.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 177..210
score: 7.287
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 245..278
score: 7.11
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 75..108
score: 7.021
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 211..244
score: 8.762
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 313..346
score: 7.906
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 347..380
score: 7.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 279..312
score: 5.34
IPR011990Tetratricopeptide-like helicalGENE3D1.25.40.10coord: 196..402
e-value: 2.3E-36
score: 124.6
IPR011990Tetratricopeptide-like helicalGENE3D1.25.40.10coord: 77..195
e-value: 1.2E-15
score: 56.4
IPR013105Tetratricopeptide TPR2PFAMPF07719TPR_2coord: 145..172
e-value: 0.023
score: 14.4
IPR028786Bardet-Biedl syndrome 4 proteinPANTHERPTHR23083:SF17BARDET-BIEDL SYNDROME 4, BBS4coord: 26..416
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 75..380
score: 35.569

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003069 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003069EMLSAT00000003069-698916Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003069 ID=EMLSAP00000003069|Name=EMLSAP00000003069|organism=Lepeophtheirus salmonis|type=polypeptide|length=509bp
MNPALETSQSTSNGQTGNLSISNXSNIKPRSKKAPEXPAMERRNWLIHNH
YVRKEFETCKMILTSQLEESGGNCEYAHYVNGLILRQEGKIQESLEAFRI
CNVINPSNPDNVKQMGKSLHLLGRHQMAIETYKQAEIRSLGVDWEIHHHL
GVSYMYLKEFEVSKEELLKALTVHKNEMSYLCISRVLLLLGDTKGAIRML
KESLEYFPENSELSTKLGLLYLQLGQSQMAFEQLGNALIFNPLNSDALLA
LGSITQSNMDWNTALSKYKVASKIIPESPSLWNNIGMCFVGKKKSIAGIS
CLKRASYLAPFDWKIFFNLGLVHLMMQQFASAFHFLSSSANLHPKRGQTF
MLLGITLTHLKDTDNASSAYEQALLLXNKDPAIPLNFAIYHYNRGETLSS
KEKLGTMEERVLKLKSQCGLNTESDILITAGKLAKLLGMELQIEIPSPET
PNTCTETAPPKRIQSSKGIREAKTSARAQLIMEGKTGKVTYPVVEEGNSS
SSGNGKSEI
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