EMLSAP00000003104, EMLSAP00000003104 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003104
Unique NameEMLSAP00000003104
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1006
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAAcoord: 389..575
e-value: 1.2E-15
score: 68.0
NoneNo IPR availableGENE3D3.40.50.300coord: 363..588
e-value: 1.5E-74
score: 249.7
NoneNo IPR availableGENE3D2.170.270.10coord: 671..733
e-value: 1.1E-4
score: 21.1
NoneNo IPR availableGENE3D1.20.1560.10coord: 135..341
e-value: 3.0E-33
score: 114.7
NoneNo IPR availablePANTHERPTHR24221FAMILY NOT NAMEDcoord: 58..588
NoneNo IPR availablePANTHERPTHR24221:SF18SUBFAMILY NOT NAMEDcoord: 58..588
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..16
score: 0.51
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 643..737
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 290..312
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 381..529
e-value: 1.7E-31
score: 109.2
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 364..598
score: 22.642
IPR018796Uncharacterised protein family UPF0671PFAMPF10231DUF2315coord: 896..999
e-value: 8.6E-22
score: 77.2
IPR001140ABC transporter, transmembrane domainPFAMPF00664ABC_membranecoord: 135..314
e-value: 3.1E-17
score: 62.7
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 501..515
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 78..326
score: 24.671
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 74..341
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 360..588

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003104 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003104EMLSAT00000003104-698951Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003104 ID=EMLSAP00000003104|Name=EMLSAP00000003104|organism=Lepeophtheirus salmonis|type=polypeptide|length=1006bp
MLFRLCGSSMARMSSRVLLKPKKGPLALWSKNCFTPGVSGLARTGIKVVP
KDKVGPKEIFSTMFHHIWPKNEPQVRKRVMFALGLLVTAKLLNVSVPYFF
KKAVDVLNSEANDYFSLGTPAETVFAMASAILIGQTGALSKVIDRGSRGI
SFALNAMVFNIFPTIFELGLVSGVLGYNFGANYAFTALGAVGMYSVFTLG
ITSWRTQFRVNMNKAENEAGNKAIDSLINYETVKYFNNEAYECQQYDKSL
LKYETASLKTTESLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDL
IMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGA
TEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESG
SGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLF
NDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLK
LSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGK
TAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELLNTLTLPNGRSRRFV
DLISHKDNILMDSARKDAFFTYLTIIRNKIGGAMEIKESEVLDIFTKILI
NSGFMLNDTLLNIGTSLSLEFSAIDHSCRPNAIYMFTGRQIVVKALCDIA
NFDDVRIAYIGNIEPRSIRQKMLSHQYFFDCDCEECTDDPLNLEKIKSHS
PCCPQCKNLLDDDKCINCNKEVNLSRYFKIKEILKNEKEMNAKTCLYFVE
VLKYFHPFDYVSYKFCDDLIARNDLIDNNKLQILYERNILTMRKYGCIYD
IQMSEYLMNLIGILLSKQELKSVPNLLFEAKAIMEGIDESKSSCSKGSLE
SRLQSLKEDTSKFHESYWTTHNDAFIKERTQFIARLLTEKYPDQIEDKKT
LSSKEMSLFYKSFLDKRKKLHWDYNLDWQKRNARILLLSMGVELKNIFNH
FTPKAK
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