EMLSAT00000003104, EMLSAT00000003104-698951 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003104
Unique NameEMLSAT00000003104-698951
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s174supercontigLSalAtl2s174:364234..370462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003104 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003104EMLSAG00000003104-685870Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013590EMLSAE00000013590-722518Lepeophtheirus salmonisexon
EMLSAE00000013591EMLSAE00000013591-722519Lepeophtheirus salmonisexon
EMLSAE00000013592EMLSAE00000013592-722520Lepeophtheirus salmonisexon
EMLSAE00000013593EMLSAE00000013593-722521Lepeophtheirus salmonisexon
EMLSAE00000013594EMLSAE00000013594-722522Lepeophtheirus salmonisexon
EMLSAE00000013595EMLSAE00000013595-722523Lepeophtheirus salmonisexon
EMLSAE00000013596EMLSAE00000013596-722524Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776893auto776893Lepeophtheirus salmonispolypeptide
EMLSAP00000003104EMLSAP00000003104Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003104

>EMLSAP00000003104 ID=EMLSAP00000003104|Name=EMLSAP00000003104|organism=Lepeophtheirus salmonis|type=polypeptide|length=1006bp
MLFRLCGSSMARMSSRVLLKPKKGPLALWSKNCFTPGVSGLARTGIKVVP
KDKVGPKEIFSTMFHHIWPKNEPQVRKRVMFALGLLVTAKLLNVSVPYFF
KKAVDVLNSEANDYFSLGTPAETVFAMASAILIGQTGALSKVIDRGSRGI
SFALNAMVFNIFPTIFELGLVSGVLGYNFGANYAFTALGAVGMYSVFTLG
ITSWRTQFRVNMNKAENEAGNKAIDSLINYETVKYFNNEAYECQQYDKSL
LKYETASLKTTESLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDL
IMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGA
TEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESG
SGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLF
NDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLK
LSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGK
TAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELLNTLTLPNGRSRRFV
DLISHKDNILMDSARKDAFFTYLTIIRNKIGGAMEIKESEVLDIFTKILI
NSGFMLNDTLLNIGTSLSLEFSAIDHSCRPNAIYMFTGRQIVVKALCDIA
NFDDVRIAYIGNIEPRSIRQKMLSHQYFFDCDCEECTDDPLNLEKIKSHS
PCCPQCKNLLDDDKCINCNKEVNLSRYFKIKEILKNEKEMNAKTCLYFVE
VLKYFHPFDYVSYKFCDDLIARNDLIDNNKLQILYERNILTMRKYGCIYD
IQMSEYLMNLIGILLSKQELKSVPNLLFEAKAIMEGIDESKSSCSKGSLE
SRLQSLKEDTSKFHESYWTTHNDAFIKERTQFIARLLTEKYPDQIEDKKT
LSSKEMSLFYKSFLDKRKKLHWDYNLDWQKRNARILLLSMGVELKNIFNH
FTPKAK
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mRNA from alignment at LSalAtl2s174:364234..370462-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003104-698951 ID=EMLSAT00000003104-698951|Name=EMLSAT00000003104|organism=Lepeophtheirus salmonis|type=mRNA|length=6229bp|location=Sequence derived from alignment at LSalAtl2s174:364234..370462- (Lepeophtheirus salmonis)
ATGCTGTTCCGACTCTGTGGATCCTCGATGGCTCGAATGTCATCGAGGGT
CCTTTTGAAACCAAAAAAAGGTCCTTTGGCCCTATGGAGTAAAAATTGTT
TTACTCCTGGTGTTTCGGGATTGGCACGAACTGGAATTAAAGTAGTACCA
AAGGATAAGGTTGGACCAAAAGAAATCTTTTCTACCATGTTTCATCATAT
ATGGCCAAAAAACGAACCTCAAGTCCGTAAAAGAGTCATGTTTGCACTTG
GTATAACTTAAACCTTTGATTGACATTAAATTTTTAGCTTTTCTAAAGTG
AAATTTGGATCTCTATTTTAGGACTTCTTGTGACGGCCAAACTATTAAAC
GTCTCAGTTCCTTACTTCTTCAAAAAAGCTGTGGATGTCTTAAATAGCGA
GGCCAATGACTATTTTTCCTTGGGAACTCCTGCAGAAACTGTATTTGCAA
TGGCTTCAGCGATTCTTATTGGGTATGGATGTGCTAGAGCCGGAGCTGCT
GGATTCAATGAGCTTAGAAATGCTTGTTTTTGCTCGCGTTGCCCAAAGAT
CTATCCGAAAAATTAGCACAAAACGTATTTTTGCATCTTCATAATCTTGA
TATGAGTTTTCATTTGAATAGGCAAACCGGTGCATTGTCCAAGGTTATTG
ATAGAGGTTCAAGAGGGATCAGTTTTGCATTAAATGCTATGGTTTTCAAT
ATATTTCCTACTATTTTTGAACTAGGACTTGTGTCTGGTGTTTTAGGGTA
CAACTTTGGAGCTAATTACGCCTTTACGGCATTGGGGGCAGTTGGAATGT
ATTCTGTTTTTACATTGGGGATTACATCTTGGAGAACTCAATTTCGGGTT
AATATGAATAAGGCTGAAAATGAAGCAGGAAATAAGGCAATCGATTCCTT
GATTAACTATGAAACTGTTAAATACTTTAACAATGAAGCCTACGAGTGCC
AGCAATATGATAAAAGTCTCCTGAAATATGAAACTGCCTCACTTAAAACA
ACTGAAAGTCTGAGTCTACTTAATTTTGGACAGAATGCAATTTTTAGTGT
AGCCTTGTCTGCCATTATGATGATGGCAGCTAAGGACATTTCAAATGGAG
CACTAACAGTTGGAGATTTAATAATGGTTAATGGACTCCTTTTTCAATTG
TCCCTGCCCCTCAATTTTCTGGGATCTGTATATCGGGAAATTCGTCAATC
ATTGATTGATATGCAAGTCATGTTCCAGCTTATGGCGACTCCCTCAAAAA
TAACCTCTTCAAAAGGTGCTACAGAAATTAACTTTATTAATAATATGGAA
GACGCTTCCATCACTTTTGATGATGTCAAATTTGGATATAATATCGATAA
AAATATTGCCAATGGGCTGAGCTTTTCTGTTGAGTCTGGAAAAACAATAG
CAATTGTTGGGGAATCAGGCTCTGGCAAGTCAACTCTTGTAAGATTGTTG
TACCGCTTTTATGAACCCCAACTTGGTTCCATAAAAATAGGAAATTACAA
TATCAATGAAGTGACTTTAGATAGTCTTCGACGTCAAATATCTATTGTTC
CTCAAGATTGTGTTTTGTTCAATGATACCATATTCCATAATATAAAATAT
GGAAATTTGAATTGCTCTGACGAAGATGTTTATAAAGTTGCTAAATTAGC
TGAAATTGATAATGCAATAAGGTCATGGCCACAAGGTTACTTAACCCAAG
TTGGAGAACGAGGACTTAAACTATCTGGTGGTGAAAAACAGAGGGTTGCA
ATTGCTAGAGCAGCTTTGAAGGACAGTCCCATTATCATATTCGACGAAGC
AACATCTAGCCTTGATTCTATAACCGAGACAATGATTATGAAGGCACTGA
AGAGAGTTACGTCTGGAAAAACGGCCATCATAATTGCCCATCGTCTCTCA
ACTGTTGTACATGCCGATGAAATATTTGTTCTATCCAACGGCAAAGTAAT
AGAACGTGGAACTCATGAGGAATTGCTTAATACACGTGAATCTCGATACT
CCGTTCTTTGGGAATCGCAGCATTGGCATGAAAGGACGCGTCTGGAGAAG
ATGATTAATAAATAAGATAAATCATTAGACTCCTTAAATTTGATATCGAT
TAATAATCATTTATTTGTATGAGCTCGAACACTTTTGTTCATGTAATTGT
ATACTCTCGTTATTGAACGCATGCATAATATGCACTTATTCTGATTCATT
TTTATTTTAAGAACGCAGTATATTAGTTTTAACTGTTGACGCAGTATATT
AGTTTTAACTGTTGACGCAATTGATTGTTTAAAGAATATGTATCATGATG
AAACTTTCATCCTAATAATTACCAAACTATTGAAATGCAACTTTTATGAG
ATTAAATCCGGGAACACTGAAATGTATATATTATCTGTTTCATTATATAA
ATTGGGTTAAATTTAATGTAAATATGACATTCTATGTCATTGAAATGATA
ATTGTTTAATGCTTAACCTTTTTATTAAACAAATGCATTAATTTTTGAAA
TGCGTAAGATATGAGAATGACAGTGCCGTAATCACGGGTTATTTTTTAGG
TGGAGTCATTATGGATGATGAGCGATGAATACAACTACTAACTGTATGAA
CTGTTAAAATTTCAATTTAATGTAGGTGCATATGAAATTGAGAAAATTAT
TTTGAAATTCTCGTCAAATGGAAAAAAAAGTGTCTATTCATTTCAGTGTT
CCCTGATCGTCGATATTGTAACATCACCTCAGCTCGAGTTAACATTATTT
CCTCTTTTTTACCTAACTAGGACCATGGTGTATAAAATTGGGGACGAAAT
CCTAAGATGTACTCCTTTCTCATATGCCATTAGAGAGCAACATCGTCATA
AAGTCTGCGACTTTTGCCTTTCAAGCGGTCAAGGAAAAGTTAGGAAATGT
CTCAGATGTTGTGTCATATATTACTGTGGAAAACAATGCCAAATGTCATC
TTGGGCTGAAGTTCATAAACACGAATGTAAATATTTGAAAATGTTAGATT
CAAAAGAGCCCCCAAAAACCTTGCTTTTAATTGTTAGAACACTATGTAAG
CTTACATTTGGGGGTGGATATTCTGAGGAAGGTAAAGAAACATTAACACA
TATTATATGTTGTGTACAAGTTGCGATTTTGTTTAAGTTGTAACCATAAT
ATGGGATGATAATAATGCAATAATTGAATATTTCATGGATAATCAATATA
CCTATTAATGGTGTCATTTTTGACTATTTTAATTCAAATGACTAAAATAT
AAGTATTCTGTGGAACATTATAAACTTCAAATGCCCACAGTTATGCTACT
CATAAATACATAATAACCATGCAATTTTAATCGATTAAAAAGAAACGATT
TTATGAATTAATAGTTGGTACTTAGAATGATGAATGTTGTAATTAAATAA
CGTATTTTAAGACCAAGAAAACTTCCACTCACCATATTATATATTATTCA
AATGAAAGAAATATCTTATTTTATTTAATTGCGAAAAATTTAGTTACTTT
GCCCAATGGACGCTCTAGAAGATTTGTTGACCTTATATCTCACAAAGATA
ATATTCTAATGGATTCAGCGCGTAAAGACGCATTTTTTACGTATTTAACA
ATAATTAGAAATAAGATTGGTGGGGCGATGGAAATTAAGGAATCTGAAGT
ACTGGATATATTTACGAAAATACTCATAAACTCCGGATTTATGTTGAATG
ATACGCTTTTGAACATTGGAACATCATTATCATTAGAATTCTCTGCCATA
GATCACTCATGTAGACCAAATGCAATCTATATGTTTACTGGTCGTCAGAT
AGTTGTCAAAGCCCTCTGTGATATTGCTAATTTCGATGATGTAAGAATAG
CTTATATCGGAAACATTGAGCCACGGAGCATTAGGCAAAAAATGCTATCG
CATCAGTATTTTTTTGATTGTGATTGCGAAGAATGTACTGACGATCCCTT
GAATCTTGAGAAGATTAAATCACATAGTCCATGCTGTCCTCAATGCAAAA
ATTTATTGGATGACGATAAATGCATTAACTGTAATAAGGTAAATAATGAT
ATCATATAATTTAAAATATGTATTTAAAAGTATTTAATTCTTTCATAGGA
AGTAAATTTGTCTCGATATTTTAAAATAAAAGAAATATTGAAAAATGAGA
AAGAGATGAATGCAAAAACTTGCTTGTATTTTGTAGAAGTGTTGAAGTAC
TTCCATCCCTTTGACTATGTATCGTACAAGTTTTGTGATGACCTAATAGC
TCGTAATGACTTGATCGACAACAATAAATTACAAATTTTATATGAAAGGA
ATATTTTGACGATGAGGAAGTACGGCTGTATCTATGATATACAAATGTCT
GAATATTTGATGAATCTTATAGGCATACTTCTATCTAAGCAGGAATTAAA
GTCTGTACCTAATTTACTTTTCGAAGCTAAGGCTATCATGGAGGTTATAT
ACCCACACGGCCACTCTATATTTGAGGAATTTGATCATTTAAATCTTTTC
TACCTACAAATGAAGAATACATAATATAATTATGCAAATGAATTAATAGA
GTTATTATTTTAATATGCATACGCAATGGGATTTCTTATTAAGAATTAAT
GCTTTATTGAGCACATTTTTAAACTTTGAATGATTATATATAGTAATTTT
CGTCTAGTAAGTTAAAGTACAAGCCACGTAATGCTCAGCCTTAAGAATAT
TGCTACTAATTCAATTATTAAAATGAAATAAAATCAAACTTTTATTAATT
ATCCAAGATATGGATGGMCAGGGATGTTGCTAGTTCTCATTATTTNAGGG
GGCATAGCTCCAAAAATTATCGACACCGTAATATAAATGACTTATATAAA
TAGGTTTATTCTTTAAATACTTATATATGATAAATTTTTTGGGACTAGCG
ACGCTACTGTGCATACATACTGACACAATCAAAATCAATGGTTAAATTCG
TTATAAGTTAAGTACCTAATAATTAATAAATATTCATCTAGCTATTATTA
ATAGAAAAGGTTTAGTGAGACATGGGAGGAGATAAATATTTTAATTAATA
TAATTGTGTATGTATGTTTTAGGGGAGACCCGAACGAGTTGTCATAAAGT
ATGTTATTGACTTACCATGGAAATCTGTTCAATGTTTGTAAATGTAGCCC
ATAGTCCATAATTTGGATATTATTATTAATCCAAAATTTGCAATTTCTAA
AGAATGTATCGATGATGGCAATTCAGTCAGTCTTAGGATTTTTGAGACAA
CAAGGGCAAAACAAAGCAGGAACTAATAATATAGCAATATTTTTGTGAAA
CTAATTTGGGATCGCAGTAATGCTCATTCTTGACCACTGGTTATGAATTG
AATTAAATTTCATTTTTGAAAAAACAATGTATTATCGGTGAATTAGCATG
AAAAAGAACTTGCTTCGGTCTCCCCTACTATACAAATATTTTCCTGGAGT
AGAAGTACTATTTATTGTGTTGGGCGAGCTGAAGGACAGAGCCTACGTAC
ATAGGTCGTCCACAACAACTAACGTTTTTCGTCTACATACTGACAGAAAG
GTGAAAAAAAGAAGAATCCTAACGAAATATGATGTTGATGTGGGTCCCCC
TTGTTAAATTGCTTCGAAGAAGAGGGGGAGGACCATTGCCATTCCAGGTG
AAGTCCACTTTTACCACGCATCAGGAGTCTGCTGTGAGTTGTTGTTTTTT
AAAAAGATGTCTTCAGGATATCCTTGAATCGCTCTCTATTGATTATTTAA
TTTATTTTTAATTATTATCTGATAAAATAAAGGGAATTGACGAATCCAAG
TCTTCATGTTCGAAGGGTTCCTTGGAATCGCGACTCCAAAGCCTTAAAGA
GGATACATCCAAGTTTCATGAGTCTTATTGGACGACTCATAATGATGCTT
TTATTAAGGTAATCATAATTAATTGAATACTCTGGTTATTAAAATGTATC
TTATTTAATGAATAATTATTTTGCTCTTGTATTGTGAAGGAACGAACTCA
GTTTATCGCTCGACTTTTAACGGAAAAATATCCAGATCAAATCGAAGATA
AAAAAACTCTATCGTCGAAAGAAATGTCTTTATTTTACAAGTCTTTTTTG
GATAAGCGGAAGAAATTGCATTGGGATTACAATTTGGATTGGCAGAAGCG
TAATGCCAGGATATTATTGTTGTCTATGGGAGTTGAACTTAAGAATATAT
TCAATCATTTCACTCCAAAAGCAAAATAG
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