EMLSAP00000003158, EMLSAP00000003158 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003158
Unique NameEMLSAP00000003158
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length309
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1coord: 81..161
e-value: 0.0021
score: 27.3
IPR025721Exosome complex component, N-terminal domainPFAMPF14382ECR1_Ncoord: 22..66
e-value: 4.9E-15
score: 54.4
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 81..154
e-value: 0.001
score: 18.3
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 76..168
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4PANTHERPTHR21321PNAS-3 RELATEDcoord: 1..308
NoneNo IPR availablePANTHERPTHR21321:SF2RRP4coord: 1..308
NoneNo IPR availableSUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 171..302
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 21..76
IPR003029Ribosomal protein S1, RNA-binding domainPROSITEPS50126S1coord: 83..161
score: 9.289

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003158 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003158EMLSAT00000003158-699005Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003158 ID=EMLSAP00000003158|Name=EMLSAP00000003158|organism=Lepeophtheirus salmonis|type=polypeptide|length=309bp
MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEE
KECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKV
EVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTL
YKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILG
LNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAI
ARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKT
QLRLEXDNH
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