EMLSAT00000003158, EMLSAT00000003158-699005 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003158
Unique NameEMLSAT00000003158-699005
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1763supercontigLSalAtl2s1763:6194..7583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003158 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003158EMLSAG00000003158-685924Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013849EMLSAE00000013849-722777Lepeophtheirus salmonisexon
EMLSAE00000013850EMLSAE00000013850-722778Lepeophtheirus salmonisexon
EMLSAE00000013851EMLSAE00000013851-722779Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768611auto768611Lepeophtheirus salmonispolypeptide
EMLSAP00000003158EMLSAP00000003158Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003158

>EMLSAP00000003158 ID=EMLSAP00000003158|Name=EMLSAP00000003158|organism=Lepeophtheirus salmonis|type=polypeptide|length=309bp
MDISLANEWEKPPEDVDEATTFVTPGDIITRESGYMRGHGTYASDEGNEE
KECLIASVGGVVKRVNKLIRVLPLRSTYQGEIGDVLVGRIVEVQQKRWKV
EVNSRLDAILHLSSVNLPGGELRRRSSEDELSMRTYLREGDLISAEVQTL
YKDGSMSIHTRSLKYGKLEGGTVVKVSPSLIKRQKTHFHTFPGGVSMILG
LNGFIWLSIKSMISISEEDDDYEKQEYENGSNSFDDSDLGLIESNPRLAI
ARLRNVVLALAANGVQLWDTSIIYGFKASENYDPKSLLKRDVMYDVARKT
QLRLEXDNH
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mRNA from alignment at LSalAtl2s1763:6194..7583+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003158-699005 ID=EMLSAT00000003158-699005|Name=EMLSAT00000003158|organism=Lepeophtheirus salmonis|type=mRNA|length=1390bp|location=Sequence derived from alignment at LSalAtl2s1763:6194..7583+ (Lepeophtheirus salmonis)
TTTATATGCAGCTGAATACAATTTGTTTATACTAATCAGCTGAAAAATAC
CTATGTAAATAATAAATAATTGCGAGTTCCATGCATGTTTGATGTTGCCC
GGTTATATCTTATTTTATGTTTATTAATTATCATCGAATACAGTTACCAT
GGATATTAGTTTAGCCAATGAATGGGAGAAACCTCCAGAAGATGTGGATG
AAGCGACTACCTTCGTGACTCCTGGAGATATTATAACCAGGTAACGTTTT
TGTATGATTAAAGTATAAATTATTATTATTGTCTGATACTGTACATTCTT
GATTTTAGAGAATCGGGTTACATGAGAGGACATGGAACGTACGCATCAGA
TGAAGGAAACGAGGAGAAGGAATGCTTGATTGCATCTGTTGGAGGAGTTG
TCAAACGAGTCAATAAATTAATACGCGTACTTCCACTGAGAAGTACCTAT
CAAGGTGAAATCGGAGATGTTCTCGTGGGTAGAATCGTTGAGGTTCAACA
AAAAAGATGGAAAGTGGAGGTAAATTCCCGTCTTGATGCTATTCTTCACC
TTTCATCTGTAAATCTCCCTGGGGGTGAGCTACGTCGAAGATCCTCTGAG
GATGAATTATCCATGCGGACATATTTGAGGGAAGGGGATCTCATCTCTGC
AGAAGTACAAACCCTTTATAAGGATGGTTCAATGTCAATTCACACGCGAT
CCCTCAAATATGGGAAATTGGAAGGTGGAACAGTTGTCAAAGGTTATTAT
GAGCACTGCTATAATTAATTATTCTTATGTATTCACCCTTACAATTTTCA
CTCAGTCTCCCCTTCACTAATAAAGCGACAAAAGACCCATTTCCACACGT
TCCCTGGAGGTGTTAGCATGATACTTGGTCTAAATGGATTCATATGGCTG
AGCATCAAATCAATGATCTCAATTTCTGAAGAAGATGATGATTACGAAAA
ACAAGAATATGAAAATGGCAGTAATTCTTTTGATGACTCAGATTTGGGAC
TCATAGAATCAAACCCTCGTTTAGCCATTGCTCGACTTAGAAACGTCGTT
CTCGCACTTGCTGCAAATGGTGTTCAGCTTTGGGATACTTCTATTATATA
CGGATTCAAGGCTTCAGAGAACTACGACCCAAAAAGTTTGCTTAAAAGAG
ATGTTATGTATGACGTGGCTAGGAAAACACAATTGAGACTGGAGMCTGAC
AATCATTAATATACATTATTATTAATATTAATTACTTTCAATTATATATA
AATGGATATTTTTTTATATTTTGCATTCTTCTAGGGTCCTTCTTGAAGGA
GGGTCCCTCTAAATTCCAACTTTTGATATCCTTTACAAATAAATCTTAGA
TTATATATTTGTAGCATAAGTTTGTCATACTGCTTTAAAG
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