EMLSAP00000003177, EMLSAP00000003177 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003177
Unique NameEMLSAP00000003177
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length318
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004274NLI interacting factorSMARTSM00577CPDccoord: 139..280
e-value: 5.6E-18
score: 75.7
IPR004274NLI interacting factorPFAMPF03031NIFcoord: 141..301
e-value: 1.7E-27
score: 95.9
IPR004274NLI interacting factorPROSITEPS50969FCP1coord: 136..296
score: 25.336
NoneNo IPR availableGENE3D3.10.20.90coord: 6..85
e-value: 8.3E-26
score: 89.2
NoneNo IPR availablePANTHERPTHR32054FAMILY NOT NAMEDcoord: 6..316
NoneNo IPR availablePANTHERPTHR32054:SF1SUBFAMILY NOT NAMEDcoord: 6..316
NoneNo IPR availableSUPERFAMILY54236Ubiquitin-likecoord: 5..83
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 19..78
e-value: 3.9E-6
score: 26.0
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 19..76
score: 9.482
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 133..304
e-value: 2.4E-13
score: 49.3
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 130..305
IPR011943HAD-superfamily hydrolase, subfamily IIIDTIGRFAMTIGR02245TIGR02245coord: 120..313
e-value: 5.2E-89
score: 294.8

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003177 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003177EMLSAT00000003177-699024Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003177 ID=EMLSAP00000003177|Name=EMLSAP00000003177|organism=Lepeophtheirus salmonis|type=polypeptide|length=318bp
MNIEYLIIKWGGKEYRIEDLNENTSVLQLKKLIQERTEVRPERQKLLNMK
LNGKAPGDDILLSTLPTKNGAKIMMMGSLEKDIAATEIVPDDLPYVKNDL
DDHDDGEETSIENRSEYLTKIQHRIDNCEIHLRNELRPGKKLLVLDIDYX
LFDHRSPAENAGELMRPYLHEFLTSAFKDYDIAIWSATSLKWIKEKMRLL
GCDSHTDYKLAFFMDCRHMISVHTQKYGVVEVKPLGVIWGKFPQYKKENT
IMLDDLRRNFLMNPQNGLKIRPFRDAHVNRNSDEELLKLSEYLKVISHLP
DFTTLKHRKWESYLRRYT
back to top
Add to Basket