EMLSAP00000003342, EMLSAP00000003342 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003342
Unique NameEMLSAP00000003342
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length405
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..50
NoneNo IPR availablePANTHERPTHR12170MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDcoord: 1..405
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 344..401
IPR006595CTLH, C-terminal LisH motifSMARTSM00668CTLHcoord: 153..226
e-value: 0.0014
score: 27.9
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 153..226
score: 9.214
IPR013144CRA domainSMARTSM00757CRAcoord: 222..315
e-value: 4.0E-17
score: 72.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 348..403
e-value: 6.4E-6
score: 25.0
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 350..389
e-value: 9.3E-16
score: 57.1
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 156..309
e-value: 2.2E-30
score: 105.1
IPR027711Rmd5PANTHERPTHR12170:SF3SPORULATION PROTEIN RMD5-RELATED (GLUCOSE-INDUCED DEGRADATION PROTEIN 2)coord: 1..405

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003342 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003342EMLSAT00000003342-699189Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003342 ID=EMLSAP00000003342|Name=EMLSAP00000003342|organism=Lepeophtheirus salmonis|type=polypeptide|length=405bp
MDACVGVKKEVDKVISKINEWNKTKNEDLDGHISRVQEIIEKLKQHEDEE
KLNPVEIYVIRIALINIKKFITQIASQHRDLHSSVSKVGKTIDRNFISDF
NSVSQEEFFSEESKTRFLHQVILEHFYRQGRLEISDILSKEAQINEYQAL
KEPFFDLNSILESLRNKDSGPALTWAFTLRSEWNARVKYGPYVKNVQSDG
NIGSPLELRLHRLRFIEMLRSGKRLEAIKYARQHFPQFVDGHEKEIQCLM
GACMYPNIAESPYAHLLSPSLWTDACDHFVREAXALMGXSVESPLSVVIN
AGSQALPALLNIKQVMLHRQVSGTLWNAKDELPIEIDLGNNCRFHSVFAC
PILRQQTSDLNPPLRLTCGHCISRDALTKLSTGQKIKCPLCPIEQNPNDA
RQITF
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