EMLSAP00000003386, EMLSAP00000003386 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003386
Unique NameEMLSAP00000003386
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1642
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..292
NoneNo IPR availableCOILSCoilCoilcoord: 302..323
IPR002454Gamma tubulinPRINTSPR01164GAMMATUBULINcoord: 1557..1572
score: 92.38
coord: 1293..1313
score: 62.95
coord: 1610..1633
score: 83.33
coord: 1378..1393
score: 71.29
coord: 1635..1642
score: 23.96
coord: 1522..1533
score: 72.14
IPR002454Gamma tubulinPANTHERPTHR11588:SF7TUBULIN GAMMA CHAINcoord: 1266..1639
IPR000217TubulinPRINTSPR01161TUBULINcoord: 1370..1394
score: 30.4
coord: 1396..1414
score: 65.09
coord: 1273..1293
score: 62.61
coord: 1358..1369
score: 50.63
coord: 1314..1333
score: 48.6
coord: 1415..1436
score: 33.71
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 1266..1639
IPR018316Tubulin/FtsZ, 2-layer sandwich domainSMARTSM00865Tubulin_Ccoord: 1520..1640
e-value: 6.0E-12
score: 55.7
IPR018316Tubulin/FtsZ, 2-layer sandwich domainGENE3D3.30.1330.20coord: 1538..1640
e-value: 1.4E-34
score: 118.0
IPR018316Tubulin/FtsZ, 2-layer sandwich domainPFAMPF03953Tubulin_Ccoord: 1535..1642
e-value: 2.6E-36
score: 124.3
IPR003008Tubulin/FtsZ, GTPase domainSMARTSM00864Tubulincoord: 1310..1518
e-value: 3.9E-53
score: 192.5
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 1266..1497
e-value: 3.4E-68
score: 229.5
IPR003008Tubulin/FtsZ, GTPase domainGENE3D3.40.50.1440coord: 1266..1537
e-value: 6.6E-100
score: 333.4
IPR003008Tubulin/FtsZ, GTPase domainSUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 1265..1517
IPR002110Ankyrin repeatSMARTSM00248ANKcoord: 1136..1165
e-value: 2.8E-7
score: 40.2
coord: 1203..1233
e-value: 4600.0
score: 0.0
coord: 1098..1131
e-value: 2200.0
score: 2.4
coord: 1169..1199
e-value: 1.2E-5
score: 34.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1136..1168
score: 13.758
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1169..1202
score: 11.327
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 1097..1225
e-value: 9.9E-35
score: 119.1
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1141..1219
e-value: 6.7E-19
score: 67.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1136..1223
score: 27.584
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 1097..1222
IPR021939Kank N-terminal motifPFAMPF12075KN_motifcoord: 68..101
e-value: 3.9E-8
score: 32.8
IPR017975Tubulin, conserved sitePROSITEPS00227TUBULINcoord: 1404..1410
IPR008280Tubulin/FtsZ, C-terminalSUPERFAMILY55307Tubulin C-terminal domain-likecoord: 1518..1640

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003386 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003386EMLSAT00000003386-699233Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003386 ID=EMLSAP00000003386|Name=EMLSAP00000003386|organism=Lepeophtheirus salmonis|type=polypeptide|length=1642bp
MKCSAFTSNINHQNSRRSNSLAEEEEEEDEGISTMKITNGNYIHLHNNNV
SPTVTTSIGGRKFEIPLPFGYHMDLDFLRFCSEELVNGENIERLKDLKRT
RRRQRKTLEALMGIKQEQKDREKRLIRDLPHANRRLSPFSRSEKSVLDED
EGGDFEEERRRQNYGDQFMKEALKDAVRDFERCIADTTTKFTDRRLYNNN
TFPRSSRDPEDKLMMRQSSNSSISSVSTSSFHGGNSEIPHGSSSNNNAHL
QDRMETDSIISISSEMSASTLRNIREQMARSLAKLKDYEKQVEAIPVMQV
KLSVLKEEKRLLMLQLKQKELEMTRSLSRNRNNSAVDDVDMLYDTEDDEE
EDYAVGGGKQQSNGTSKRRSSFYHYVDPSSRPRARSESPYGXGSSNKLNP
EEFISYQRHKRSNSCGYNSDDSLISPTDYKSLNRRVQGSSNLASTPLPGD
QRTELNFCITEHKKPPETTDSSCNTESVRMRDHGVNTKDVSTGTRGTNTL
KPRTSTRATKTTLSMEDIITREESEKLVQEAVFKTEEELMECPLLQKAMA
RVEEEVIRGGPFEKVDSSCQVGVENICPFVISVGVQAEFVEYKPATYEIS
TQAQPEQSDFECQSYHHHHHPSPIPEEPEGIETVSIGVGDCKVYEDPVLP
LQCRNVGVCTEKWVEVIKASKQTDTEDFAYKDTESPRVADILAELPSTPP
VSRKGSYGRIGSPSHSRRTSTSSPSVSRKNSRSASTMTDELPKKNMSTTS
TSANSPVMKSIGTCTMVLPLKTEEFILPAPGSPLTTPDQEKLKFNLCDKC
NTDIKTAATGIVIGSSSLEKKKLSLQVQPPSPDTPWISKIPRPIPENPDV
SKLKSASSTCNLTSSLIEQSYRPRSPLLQRSKSSLTPSMGRKSLSPSYSN
PLSPPSSRRSNIGTPPPHPQTPPINSNTSRRIPSPLTRSYSPSEKRSLIP
KLSPISQRKAVSVSEIRESKKSSNSIEERRGTPSMIPRVVXPPALRKMYP
KESXKXATPDRNVVRKNTYTKHTTGVSELELGNGVESKQPSLAEKLKRKM
GKEEAIKVVAAATRISEESVNHEKKKASSYPLPGAALFAPIDENRIKAGY
TCIMLISLAQINNSTHKAVVERLFTAGDVNIXASQHGQTALMLAVSHGRL
DMVRLLVEAGGDINVRXEDGSTALMCAAEHGHMEIVKFLLLQSDTNVNAK
DNDGLTALAVAMEAGHRDIGVVLYASMSFSRGASPYSSMRMKRPGSVTPY
FDSDCFFHHLIKMPCEMIMLQLGQCGNQIGFEFWKKLCKEHGISPEGMLE
EHANEGLDRKDVFFYQADDEHYIPRSVLLDLEPRVINNIMNTEYRKLYNQ
ENIFLAKDGGGAGNNWGSGFSQGKKHHEEIFDIIDREAEGSDSLEGFVIT
HSIAGGTGSGMGSYLLQNLADRFPKKLVQTYSVFPNQDSNQDSTGSIGVS
DVVVQPYNSLLTLKRLTRSADCVVVLDNTALNRIAVDRLRIENPSFSQIN
ELVSTIMSVSTTTLRYPSYMNNDLIGLIAPLIPTPKLHFLMTGYTPLSTE
AEHAAVRKTTVLDVMRRLLQPKNMMVSTYADKQVAHCYISILNIIQGEVD
PTQVHKSLQRIRERKLASFIPWGPASIQVALSRKSPYVSTTH
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