EMLSAP00000003422, EMLSAP00000003422 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003422
Unique NameEMLSAP00000003422
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length408
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 135..157
score: 20.73
coord: 297..321
score: 23.55
coord: 50..74
score: 20.41
coord: 83..104
score: 26.47
coord: 338..364
score: 27.85
NoneNo IPR availableGENE3D1.20.1070.10coord: 35..374
e-value: 9.9E-39
score: 132.3
NoneNo IPR availablePANTHERPTHR22751:SF12G-PROTEIN COUPLED RECEPTORcoord: 17..390
NoneNo IPR availablePANTHERPTHR22751G-PROTEIN COUPLED RECEPTOR-RELATEDcoord: 17..390
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 292..380
coord: 35..259
NoneNo IPR availableTMHMMTMhelixcoord: 337..359
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 300..322
NoneNo IPR availableTMHMMTMhelixcoord: 227..249
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
IPR0194277TM GPCR, serpentine receptor class w (Srw)PFAMPF103247TM_GPCR_Srwcoord: 55..374
e-value: 1.8E-38
score: 132.3
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 65..356
score: 23.18

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003422 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003422EMLSAT00000003422-699269Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003422 ID=EMLSAP00000003422|Name=EMLSAP00000003422|organism=Lepeophtheirus salmonis|type=polypeptide|length=408bp
MVVPRELNVTTKDLLHLFASSPISPTVGDNISEEEAMCNLTDFYKGYRNV
HGWLSLCVCIFGTIANILNIIVLTRKEMNGSPINLILTGIAVADMLVMIE
YIPFTLHRNLLTGRSKEIEYSWGFSLFVWSHSNFSLVIHAVSIWLTLSLA
VWRFIMIRFHSLSPIYCTLGRCKIMLFLAYVIPVFLCIPNYIATTINKKT
NQGKVIYVLDWSDIATAHNKLLYRINIWLYTFILKLIPCIILTIITGWLI
KALYKVEERSARLRSRHYDSNTKSKLRNGNGQTSVIVNSRKKSADRTTRL
LVVILVLFLLTEFPQGILGMLSAIYGDKFFKDCYLPLGDVMDAMALINSA
INFIFYCFMSKQFRKTFVETFGCRSLNMSSNQVQMKNGQNNGLAARKRRS
SPIPSLSI
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