EMLSAP00000003717, EMLSAP00000003717 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003717
Unique NameEMLSAP00000003717
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length634
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126CadherinPRINTSPR00205CADHERINcoord: 426..452
score: 29.59
coord: 372..385
score: 32.96
coord: 258..270
score: 27.2
coord: 277..296
score: 29.95
coord: 462..479
score: 42.55
coord: 185..214
score: 24.8
IPR002126CadherinSMARTSM00112CAcoord: 207..296
e-value: 1.8E-8
score: 44.1
coord: 81..183
e-value: 0.39
score: 7.9
coord: 396..478
e-value: 5.7E-12
score: 55.8
coord: 502..584
e-value: 2.0E-19
score: 80.5
IPR002126CadherinPFAMPF00028Cadherincoord: 379..468
e-value: 1.9E-10
score: 40.7
coord: 487..576
e-value: 2.2E-13
score: 50.1
IPR002126CadherinGENE3D2.60.40.60coord: 370..476
e-value: 2.1E-19
score: 69.5
coord: 177..297
e-value: 2.5E-20
score: 72.5
coord: 477..582
e-value: 8.3E-29
score: 99.8
coord: 583..618
e-value: 5.5E-8
score: 32.6
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 186..298
score: 18.179
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 481..586
score: 23.813
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 44..185
score: 12.304
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 375..480
score: 19.144
NoneNo IPR availablePANTHERPTHR24026:SF14SUBFAMILY NOT NAMEDcoord: 92..622
NoneNo IPR availablePANTHERPTHR24026FAMILY NOT NAMEDcoord: 92..622
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.866
NoneNo IPR availableTMHMMTMhelixcoord: 7..24
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 574..584
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 468..478
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 370..480
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 179..290
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 574..620
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 468..563

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003717 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003717EMLSAT00000003717-699564Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003717 ID=EMLSAP00000003717|Name=EMLSAP00000003717|organism=Lepeophtheirus salmonis|type=polypeptide|length=634bp
MRWLPLVLVHWIVGLCFLTRMGXASXDLLAMPIATFPSFPLNFTSPTYFG
SIPENSVGKVLVSPSYVFGKDSARLLWGIPLGGEGKRPFHNWHITYHIVT
AAGEAGEAAEXFKAEXALIGDFLFLNVRLRLGNLRVLNREKRDEYILEIV
ALVKDEKNRSLTPDPNLRTTMFIQVSDTNDLDPIFPSSNYTFRIDKDMPL
HRTIGTIYAEDADEGINGEIYYSFHPSTSSKIMELFYLHPMSGSISLLKN
IGNEKKSVYSMAVVXVDRGIKTISKTYASDIANINIIVEDVNYFDPDISV
IFFQNIVQESFSNLFAIVEVDDKDEGRHGEVLSLEILNQNDDSNFPTDNG
IPQRYSYQFLNVKFDGSINDQPLFNRNVFHVYVNESIPINTQLIRLQRNT
VFKDNFLVSYSIVGGNKHKHFKINNRTGVLYSAEKLDSEVRSSYTLAVTA
LYSPITGKRKQTSVKIRIFVIDVNDNDPAFDMNVKEVFFHENQPPGSTVI
KIKAKDKDSGENGYISFTFANLNAIPFEIDHFTGVIRSTKLIDYESDKRI
YKLRIRASDWGYPFSRQEEMELLVRIQDVNDNRPQFDKTKCIGKISRNLP
IGSEIFNMTAIDLDEGNIVSYRXGIFNLTFCSRI
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