EMLSAP00000003862, EMLSAP00000003862 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003862
Unique NameEMLSAP00000003862
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length648
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 492..506
score: 40.5
coord: 416..430
score: 39.89
coord: 534..548
score: 36.82
IPR001680WD40 repeatSMARTSM00320WD40coord: 317..356
e-value: 7.3
score: 11.5
coord: 430..463
e-value: 0.013
score: 24.7
coord: 550..589
e-value: 9.7E-4
score: 28.4
coord: 390..429
e-value: 4.7E-10
score: 49.4
coord: 508..547
e-value: 2.7E-10
score: 50.2
coord: 466..505
e-value: 4.5E-10
score: 49.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 393..428
e-value: 2.1E-12
score: 46.2
coord: 553..588
e-value: 5.3E-4
score: 19.6
coord: 470..505
e-value: 4.4E-12
score: 45.2
coord: 431..463
e-value: 8.1E-9
score: 34.9
coord: 509..547
e-value: 6.1E-10
score: 38.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 397..428
score: 15.688
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 473..514
score: 16.39
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 557..588
score: 11.778
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 431..472
score: 13.516
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 515..556
score: 16.858
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 321..593
e-value: 1.3E-74
score: 250.3
IPR007582TFIID subunit, WD40-associated regionPFAMPF04494TFIID_90kDacoord: 77..179
e-value: 1.7E-27
score: 96.0
NoneNo IPR availablePANTHERPTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 19..646
NoneNo IPR availableSUPERFAMILY160897Taf5 N-terminal domain-likecoord: 72..197
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 534..548
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 492..506
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 397..598
score: 47.484
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 391..634
coord: 317..359

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003862 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003862EMLSAT00000003862-699709Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003862 ID=EMLSAP00000003862|Name=EMLSAP00000003862|organism=Lepeophtheirus salmonis|type=polypeptide|length=648bp
MMFSNVVEIPGIEMDLDSVLSFLRKHNLNKTEDLLKDEFKSDNKSIPKSQ
DSNHPDATTDNHDDVKDQEESDVLRSYKSDEKNPLMYSHVYRELESFVER
SVDLYKPELSQILYPVFVHMYLELVYNGHEGAAMEFIKTFGSKQESFYEE
DVQKLSYMTKPRHMRGSELIENFQTAQFTHSILWNIIQEHLYLDVYEGIA
RNKKQIXATSGGMVGEANRQANRQKXYYGLLREPDLSAFTNTILMNEPDE
EDDGEGDKPKKKKLKRDAHLKRQKNDPNAPVASRMPFPDLRDTDKAEKAR
ALKESLKRITVGPECLPSVCFYSVLNSASSLTAIEITDDSSILGAGFSDA
AIKVWSLLPSKLKVLKSADELGDINRDADDVLHRMMEDNSGVVSRTLYGH
SGPVYGISFSPDKSMLLSCSEDGTIRLWICYRGHMYAVWHVKFSPQGYYF
ASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCNYIASGSSDRS
VRVWDCVSGNCVRLMTGHKTAVSTLAFSPDGRFLASGGRDSRVLFWDIAH
GHLLADLSNHSQTVTALAFSRDGNILAXSSTDFXLAMWXFQKLINESSLE
DVNVAHNPDVRTDSKNLLVTSYSTKTSPILHLHFTRRNLLLSVGPYCG
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