EMLSAP00000003879, EMLSAP00000003879 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003879
Unique NameEMLSAP00000003879
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length737
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin-typePRINTSPR00722CHYMOTRYPSINcoord: 166..181
score: 52.24
coord: 228..242
score: 31.91
coord: 325..337
score: 72.41
IPR001254Peptidase S1SMARTSM00020Tryp_SPccoord: 140..359
e-value: 7.9E-64
score: 228.0
coord: 480..728
e-value: 2.3E-76
score: 269.7
IPR001254Peptidase S1PFAMPF00089Trypsincoord: 483..728
e-value: 2.9E-55
score: 187.1
coord: 141..355
e-value: 5.9E-47
score: 159.9
IPR001254Peptidase S1PROSITEPS50240TRYPSIN_DOMcoord: 141..432
score: 29.763
IPR001254Peptidase S1PROSITEPS50240TRYPSIN_DOMcoord: 481..733
score: 33.409
NoneNo IPR availableGENE3D2.40.10.10coord: 244..355
e-value: 1.0E-33
score: 115.8
NoneNo IPR availableGENE3D2.40.10.10coord: 141..172
e-value: 1.3E-15
score: 56.5
coord: 483..514
e-value: 1.4E-14
score: 53.2
NoneNo IPR availableGENE3D2.40.10.10coord: 515..729
e-value: 2.6E-59
score: 199.8
NoneNo IPR availableGENE3D2.40.10.10coord: 173..243
e-value: 2.2E-23
score: 81.8
NoneNo IPR availablePANTHERPTHR24262:SF9SUBFAMILY NOT NAMEDcoord: 460..731
NoneNo IPR availablePANTHERPTHR24262FAMILY NOT NAMEDcoord: 460..731
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
NoneNo IPR availableTMHMMTMhelixcoord: 346..368
IPR018114Peptidase S1, trypsin family, active sitePROSITEPS00134TRYPSIN_HIScoord: 516..521
IPR018114Peptidase S1, trypsin family, active sitePROSITEPS00135TRYPSIN_SERcoord: 678..689
IPR018114Peptidase S1, trypsin family, active sitePROSITEPS00134TRYPSIN_HIScoord: 176..181
IPR018114Peptidase S1, trypsin family, active sitePROSITEPS00135TRYPSIN_SERcoord: 326..337
IPR009003Trypsin-like cysteine/serine peptidase domainSUPERFAMILY50494Trypsin-like serine proteasescoord: 128..357
IPR009003Trypsin-like cysteine/serine peptidase domainSUPERFAMILY50494Trypsin-like serine proteasescoord: 466..731

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003879 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003879EMLSAT00000003879-699726Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003879 ID=EMLSAP00000003879|Name=EMLSAP00000003879|organism=Lepeophtheirus salmonis|type=polypeptide|length=737bp
MLHARGRYFYNQDYHEYYYYYCSRVNPLPTIVASLLLFPLFVESYLLSRL
WRNNPGLEAECDGDCRYSMSCWMSGGVATQSCGAVFQYCCERSSYGASAR
YWTNNEYGNGIGVHDDPPDIPFGPVVNDPSCGVPTISSRRIVGGXEAGFG
NFPWQALIRIGTSRCGGALISPYYVVTAGHCINSAKASSIRVYLGEYTLY
RRIEPLPREKYGVSEIELHPYYRFTPQADRYDVALLRLNTRVNYQPHISP
ICLPLKNEVYKEGTIGTVAGWGALSPTSTIRPNKLQAVDVQIINSDRXEM
WHRQKGIHVRIFSDMFCAGYKEGKRDACQGDSGGPLVVKDIRKGRWVLIG
LVSAGLPLIFALILVSSLKFTTTSFLDDPELSSHCRSQGGTCGPMLSCLL
KMGFVAGSCGGVFSVCCAQPSTVSRWIRENNHGSNHIGGGDSSSQYRSNH
KKIKFLGSRYGPVVNDPHCGRPVELTANRRVLDGKPAGFGSFPWQALIRI
GKGKCGGVLINRRHVVTAGHCVKNKPLSSLTVTLGEYHLKLANEPYPSEK
FRVTRAVVHPRFQFSPAADRYDVAVLTIDRPVQYAPHIAPICLPEAGRXP
APGTNAYVAGWGALIPDDVAGPLIPFLLPEIKRPSVLQVVNVPVLDNERC
ETWHKDKGFNIKIWPEMVCAGYRQGGKDSCKGDSGGPLMVQQRDGRWVLV
GIVSAGFSCGKPGQPGIYHRISSTSDWVTYYANPGFF
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