EMLSAP00000003976, EMLSAP00000003976 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003976
Unique NameEMLSAP00000003976
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length384
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..77
NoneNo IPR availablePANTHERPTHR22847:SF250SUBFAMILY NOT NAMEDcoord: 34..383
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 34..383
NoneNo IPR availableSUPERFAMILY109925Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domaincoord: 2..74
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 285..299
score: 46.47
coord: 179..193
score: 35.8
coord: 327..341
score: 39.19
IPR001680WD40 repeatSMARTSM00320WD40coord: 301..340
e-value: 1.5E-12
score: 57.7
coord: 153..192
e-value: 1.9E-12
score: 57.4
coord: 195..234
e-value: 2.8E-10
score: 50.1
coord: 111..150
e-value: 3.6E-9
score: 46.5
coord: 343..382
e-value: 1.3E-7
score: 41.3
coord: 237..298
e-value: 1.2E-6
score: 38.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 239..298
e-value: 1.1E-13
score: 50.3
coord: 155..192
e-value: 8.3E-14
score: 50.7
coord: 345..382
e-value: 3.3E-10
score: 39.3
coord: 197..234
e-value: 4.8E-10
score: 38.8
coord: 303..340
e-value: 3.4E-13
score: 48.8
coord: 115..150
e-value: 3.1E-9
score: 36.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 160..201
score: 17.359
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 308..341
score: 15.855
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 202..243
score: 13.048
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 118..159
score: 15.287
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 350..384
score: 13.616
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 282..307
score: 11.578
IPR017252Dynein regulator LIS1PIRSFPIRSF037647LisHcoord: 1..383
e-value: 5.4E-205
score: 690.2
IPR006594LisH dimerisation motifSMARTSM00667LisHcoord: 7..39
e-value: 5.8E-7
score: 39.1
IPR006594LisH dimerisation motifPROSITEPS50896LISHcoord: 7..39
score: 11.0
IPR013720LisH dimerisation motif, subgroupPFAMPF08513LisHcoord: 9..35
e-value: 8.2E-6
score: 25.2
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 105..383
e-value: 3.7E-87
score: 291.6
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 369..383
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 137..151
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 285..299
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 179..193
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 327..341
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 106..384
score: 64.804
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 105..381

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003976 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003976EMLSAT00000003976-699823Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003976 ID=EMLSAP00000003976|Name=EMLSAP00000003976|organism=Lepeophtheirus salmonis|type=polypeptide|length=384bp
MVLSQRQREELNKAIADYMLSNGYNETLEXFKRETDSPGEIDKKFHGLLE
KKWTSVIRLQKKVNELEAKLAEAEKEYIAGAPTRDKRSPSDWIPRPPERF
SLSGHLWDFETGDYERTLKGHTDCVQDIGFDSPGKLLVSCSADMSIKIWD
FQTYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVR
TYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDCKDELRDHDHV
VECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVS
TGQVLFTYVGHDNWVRGLVWHPGGKYLLSASDDKTIRVWDIAHKRCHKRL
DSHSHFCTSIDFHKTYPYIVSGSVDQTIKIWECR
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