EMLSAP00000004008, EMLSAP00000004008 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004008
Unique NameEMLSAP00000004008
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length761
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..105
NoneNo IPR availablePFAMPF12756zf-C2H2_2coord: 436..501
e-value: 0.0013
score: 18.6
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 517..537
e-value: 0.24
score: 11.6
NoneNo IPR availablePFAMPF13465zf-H2C2_2coord: 724..747
e-value: 4.6E-6
score: 26.5
NoneNo IPR availablePANTHERPTHR24375FAMILY NOT NAMEDcoord: 248..758
NoneNo IPR availablePANTHERPTHR24375:SF0SUBFAMILY NOT NAMEDcoord: 248..758
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 647..697
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 709..756
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 602..658
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 617..640
e-value: 0.0097
score: 25.1
coord: 737..757
e-value: 22.0
score: 10.2
coord: 404..427
e-value: 290.0
score: 0.4
coord: 435..458
e-value: 0.018
score: 24.2
coord: 545..568
e-value: 0.13
score: 21.4
coord: 649..671
e-value: 0.0046
score: 26.2
coord: 247..270
e-value: 46.0
score: 7.4
coord: 709..731
e-value: 9.6E-4
score: 28.4
coord: 487..510
e-value: 2.9
score: 16.9
coord: 169..193
e-value: 13.0
score: 12.2
coord: 517..540
e-value: 1.1
score: 18.2
coord: 588..611
e-value: 20.0
score: 10.6
coord: 278..301
e-value: 12.0
score: 12.6
coord: 677..700
e-value: 0.0014
score: 27.9
IPR007087Zinc finger, C2H2PFAMPF00096zf-C2H2coord: 678..700
e-value: 3.7E-5
score: 23.6
coord: 617..640
e-value: 0.006
score: 16.7
coord: 649..671
e-value: 1.6E-4
score: 21.7
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 249..270
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 651..671
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 711..731
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 489..510
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 547..568
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 437..458
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 406..427
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 590..611
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 679..700
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 519..540
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 619..640
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 435..458
score: 9.494
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 649..676
score: 11.177
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 737..761
score: 10.305
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 487..515
score: 8.974
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 709..736
score: 15.646
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 617..645
score: 11.967
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 677..705
score: 12.383
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 709..737
e-value: 1.1E-12
score: 47.3
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 646..672
e-value: 4.3E-4
score: 19.3
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 738..755
e-value: 6.2E-8
score: 31.8
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 678..697
e-value: 5.8E-5
score: 22.5

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004008 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004008EMLSAT00000004008-699855Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004008 ID=EMLSAP00000004008|Name=EMLSAP00000004008|organism=Lepeophtheirus salmonis|type=polypeptide|length=761bp
MSGYCGVCSSYVRQGESSYSVSRERTSLSNVGLLFKVFDILGLEHSNDGI
ICYSCYELIEEIDFFEHNAGLSKDKLRARLSLVRDEENEEMEEKEEEADG
SSSIMRNVQIGNKQLEMSSSSIVIDIITSYQFDLFKLRQXITRIGSFIYP
FNTQCPKDYWPAMKEFDSKICHLCGXLSFPSWRDKISHYLKSHSPQLPFI
CPIDNEFLTDPFDSHFIHDHGFKEWTSEFSFFKLIGETDTSLKADHEQCS
KCGLICTNEMASLYHSTFHHQMKPEPLTNCLFCPNISSNLKDLITHVLKS
HCGMTFSLNSDKCDTFDLEQCLDTPDTFLCNISKIKNEDNVFHGNDGLNQ
TKLDEILREHLETLTQIPNQINDDSEGDAWDINKLNRILDDPRNEENIKV
VGERKCFSCKLEFETHMKKICHRSQMHSSIEGPTYQCNFCSKSFSNESKA
TLHMFEEHGYSTLHPWYLSQGLITNSDYKISLGSGRYQCCICGLNCSSDT
NFLIHKISSHSSNTPEYDCNYCFDKYPSKSSLRLHVLIGHGSYKYHCPVC
SLTFDESIEFCEHVESEHIINKFDLPIESSSSAKKKVVTCDLCLLNVEGP
RMLSKHMLSIHGITLDFDCNKCGKLFESQQTLDAHMTSIHAGNLHLKDFI
CEKCSRMFSSNHLLQTHMRSHYKGNKITCETCGKTFKWQSSLVRHTRFVH
SSPTLSVKYGCKFCGKSFKDQSSLKDHVFTHTGDKPFKCDDCGKGFVRKS
LLMNHLAKCLM
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