EMLSAP00000004040, EMLSAP00000004040 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004040
Unique NameEMLSAP00000004040
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1052
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IGcoord: 227..306
e-value: 7.8E-8
score: 42.0
coord: 315..375
e-value: 0.0025
score: 27.1
coord: 132..218
e-value: 8.1E-7
score: 38.7
coord: 39..127
e-value: 0.003
score: 26.8
IPR003598Immunoglobulin subtype 2SMARTSM00408IGc2coord: 233..295
e-value: 1.6E-8
score: 44.3
coord: 321..364
e-value: 9.9E-5
score: 31.7
coord: 45..118
e-value: 1.7E-5
score: 34.2
coord: 138..206
e-value: 3.3E-11
score: 53.3
IPR003961Fibronectin, type IIISMARTSM00060FN3coord: 507..589
e-value: 4.6
score: 14.4
coord: 605..689
e-value: 0.54
score: 19.3
coord: 393..475
e-value: 1.3E-9
score: 48.0
IPR003961Fibronectin, type IIIPFAMPF00041fn3coord: 607..692
e-value: 8.6E-5
score: 22.4
coord: 516..591
e-value: 2.9E-5
score: 24.0
coord: 395..478
e-value: 8.0E-12
score: 45.0
IPR003961Fibronectin, type IIIPROSITEPS50853FN3coord: 393..486
score: 18.946
IPR003961Fibronectin, type IIIPROSITEPS50853FN3coord: 507..598
score: 12.702
IPR003961Fibronectin, type IIIPROSITEPS50853FN3coord: 604..697
score: 11.882
IPR003961Fibronectin, type IIISUPERFAMILY49265Fibronectin type IIIcoord: 391..490
IPR003961Fibronectin, type IIISUPERFAMILY49265Fibronectin type IIIcoord: 517..697
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 518..600
e-value: 6.5E-12
score: 45.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 391..487
e-value: 6.8E-17
score: 61.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 215..308
e-value: 1.6E-18
score: 66.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 309..375
e-value: 1.6E-9
score: 37.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 601..699
e-value: 7.8E-13
score: 47.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 32..121
e-value: 5.8E-17
score: 61.0
coord: 127..214
e-value: 1.6E-19
score: 69.2
NoneNo IPR availablePFAMPF13895Ig_2coord: 35..121
e-value: 8.0E-11
score: 41.8
coord: 314..352
e-value: 0.008
score: 16.1
NoneNo IPR availablePANTHERPTHR10489CELL ADHESION MOLECULEcoord: 22..960
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 32..123
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 221..315
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 128..225
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 304..357
NoneNo IPR availableTMHMMTMhelixcoord: 736..758
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 221..304
e-value: 2.8E-12
score: 46.2
coord: 127..217
e-value: 1.0E-10
score: 41.2
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 221..304
score: 13.203
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 308..375
score: 9.664
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 140..216
score: 11.261
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 33..115
score: 12.404

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004040 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004040EMLSAT00000004040-699887Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004040 ID=EMLSAP00000004040|Name=EMLSAP00000004040|organism=Lepeophtheirus salmonis|type=polypeptide|length=1052bp
MLYYINITFWGNEQKKEKSPPIPVLSSSSQSPPLILSHPESTIVPKNDPV
TLRCDTSGXPLPEIIWRRNGRKXTTAADDHRSRRVLLPNGSLFFLRTVHS
RKETDGGIYSCVARNTLGSVESLLRDKFRGEPVDSDVILGQTAELICXPP
KGNPSPTVFWKKNGQILDLETEEERLYIKDEGTLVIPDSIPGDEGSYQCI
AKNIAGTKATQRIHLEVGIVPSITKAPENASIASGKEIRLVCVAEGKPKP
MISWSKSAGSLPLSRSRIEGGLLIIKNAITTDEDVYRCMAENSAGMDTAT
AAIRIHSPPIFLVKPSNQKIAVGAPASLDCIAAGNPTPVLFWMKEGLSLS
DSGLYXCQARSVSGQSVWSSSLVVSEGGGLIDFKPMPDLSQFPGSPSKPS
LANATSHSITVTWSKPHRVGGSPLKGYQLDYYTLASPLHWTTVYNVHSEF
HTIDDLDPETTLWVLVRALNGYGLSPPSPVSKSLKTLAPDPNSRTGMDPW
SIRSKLGGRIMILIGAISVGSRKIKLEWELLISGEFVEGYHIQIRGSKEP
HYDSVTISGGGTRSHTLSDLRPNTKYFIFILPFNNRIKGRPSNLKVVSTK
EDVPSSSPDRIKIRLVNVSTGLIQWHTPPSRDLNGDLSGFKVLIFVNSSL
ESNYTLEPDVNSFLITELSSDFETAYGAKVAAYNRQGVGPFSPMVSININ
PMSGDIHGVHRNELSEFFSPEEASPHGFDIVLQEVWFVSFVSVMTLVLVI
AFGAVICIRRRKGELKNMGHYNVPIHKVDDISHVNFGNRDHLWLXSNWKS
SETNGKGKHIFINKLTNFTQNATNNSTNTMRSNSNRMDKDGDYAEVDTPK
STDTHQKDLVSKGDGPYATTSLVSDPPSSINLKNGSELEMSSLDSNKGIS
SKKSGSSSSLLASSHANHILNKSSMYQKAPSSTSSSGDSMSKMPPFLMSN
RQDMELFSSPLPHSKGSFHSNSSTPKCLSYNRAGSYGSFGNRQGASSSFG
PPLHKKKRSFFFTFNHDRMKKIQTFEVVGVIYTRDLYQDFSVLNNTKLYK
QI
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