EMLSAP00000004174, EMLSAP00000004174 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004174
Unique NameEMLSAP00000004174
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length510
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 202..210
score: 45.06
coord: 194..202
score: 51.69
coord: 137..153
score: 27.19
coord: 154..169
score: 41.24
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 134..213
e-value: 5.2E-18
score: 75.8
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 136..211
e-value: 9.7E-17
score: 60.8
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 137..164
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 134..217
score: 16.162
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 402..505
e-value: 7.3E-8
score: 31.4
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 202..229
e-value: 3.3E-5
score: 22.9
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 406..504
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 137..201
e-value: 4.5E-15
score: 55.6
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 52..504
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 136..224

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004174 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004174EMLSAT00000004174-700021Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004174 ID=EMLSAP00000004174|Name=EMLSAP00000004174|organism=Lepeophtheirus salmonis|type=polypeptide|length=510bp
MDLFSFSCFPPSSESSPMSIGLDIGELDSYLNNTFTSTPLELHHQNNLQH
HQPQHIFPPPFDFPEYQIRNYHYQLSSTEGPINGIDYGYNLVNNNEIEDF
TILNAVPLPESPIPSLIEVKEEPKKRKRRPEPMTDVCRICGDIAPPHNHY
GAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFC
RYRGCLSAGMXPSYVTTAEERLQKKKNSKRGKKLVIKLDIKEEIDYGDFP
TFRVIADINIPLTSSGSYPTMCFMIEQNRRVEHRIQCRNFTWHSIAVGVS
LMMELIRVGSKCLAPSNDIEIEVQFNENNKSIISGVTNIPNTDPVLRVNV
SSVFSARVGLKEQLLETIGSKDYIVQKTPYPNMAQDTILSMKQVFTNPWG
DGGLSRDCVNKFDNILEKMEKLNLDRKIECLLSVIPFFAGTDNPYETELL
SKVQEEINMVLFQHVYESAGPRDGKTLFSKIMSIIVDLQEIVTLCRKKAL
DFKIASCGIS
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