EMLSAP00000004250, EMLSAP00000004250 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004250
Unique NameEMLSAP00000004250
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1777
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 107..121
score: 42.63
coord: 49..64
score: 40.05
IPR002110Ankyrin repeatSMARTSM00248ANKcoord: 48..78
e-value: 6.3E-4
score: 29.0
coord: 195..224
e-value: 0.0089
score: 25.2
coord: 91..120
e-value: 1.2E-4
score: 31.4
coord: 508..555
e-value: 890.0
score: 5.4
coord: 228..258
e-value: 22.0
score: 13.9
coord: 164..191
e-value: 880.0
score: 5.4
coord: 124..160
e-value: 260.0
score: 9.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 195..227
score: 10.366
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 91..123
score: 12.209
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 157..258
e-value: 9.8E-30
score: 102.8
coord: 505..573
e-value: 9.8E-30
score: 102.8
coord: 614..629
e-value: 9.8E-30
score: 102.8
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 53..159
e-value: 3.7E-16
score: 59.1
coord: 175..251
e-value: 6.4E-13
score: 48.7
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 34..156
e-value: 4.2E-23
score: 81.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 48..251
score: 35.782
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 479..572
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 42..252
IPR019023Lamin-B receptor of TUDOR domainPFAMPF09465LBR_tudorcoord: 623..671
e-value: 2.4E-9
score: 36.5
IPR001171Ergosterol biosynthesis ERG4/ERG24PFAMPF01222ERG4_ERG24coord: 972..1241
e-value: 6.2E-41
score: 140.2
IPR010750SGF29 tudor-like domainPFAMPF07039DUF1325coord: 615..662
e-value: 2.6E-7
score: 30.1
NoneNo IPR availablePANTHERPTHR24182FAMILY NOT NAMEDcoord: 24..1713
NoneNo IPR availablePANTHERPTHR24182:SF2SUBFAMILY NOT NAMEDcoord: 24..1713
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 622..671
NoneNo IPR availableTMHMMTMhelixcoord: 1007..1029
NoneNo IPR availableTMHMMTMhelixcoord: 1161..1180
NoneNo IPR availableTMHMMTMhelixcoord: 1095..1117
NoneNo IPR availableTMHMMTMhelixcoord: 894..916
NoneNo IPR availableTMHMMTMhelixcoord: 978..1000
NoneNo IPR availableTMHMMTMhelixcoord: 1387..1409
NoneNo IPR availableTMHMMTMhelixcoord: 1696..1718
NoneNo IPR availableTMHMMTMhelixcoord: 1669..1691
NoneNo IPR availableTMHMMTMhelixcoord: 1132..1154
NoneNo IPR availableTMHMMTMhelixcoord: 1066..1088
NoneNo IPR availableTMHMMTMhelixcoord: 1528..1548
NoneNo IPR availableTMHMMTMhelixcoord: 1491..1513
NoneNo IPR availableTMHMMTMhelixcoord: 941..963

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004250 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004250EMLSAT00000004250-700097Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004250 ID=EMLSAP00000004250|Name=EMLSAP00000004250|organism=Lepeophtheirus salmonis|type=polypeptide|length=1777bp
MKMHCFTALVQECQLSAPGYKLSDSLKKKIEVFDKSDRKGVVDQTSEFGC
TPLFLACKNGSAEVVEYLLTECEADIEQRGIFQVLDEGVSHSVTPLWCAA
VSGRLSVVRVLIDNGADVNAASDSGSTPVRSACYIVRNEMPTSHFDIIQA
LVKAGANIQTPNHFGGTCLINSIQSTKLVKFLIDNDVDINAEDVQQKTAL
HYAVQENRFATAKLLMQNGADPMKVSKYGDDILQTACLKGNIMVFNYLID
KVKYDPYRIANAFELIGSTFLLDLYDLGSTLFFWKRALEIRYSGVASYPK
EDLKVHPNLKVSEINSLEELDSSLTDLQGLKFQALIMSERILGEDHKDTI
FRYMYCGASHADVNQYNECVHLWNYALKLKIRKDTLLSYDSSFTARAIVQ
LYVNILRSVFRSDNENMSMSEIREECEVSFKDVLSTTIFINEGLVKALQL
LKVNPVFQVQLDNLDIILTSWIHLIHILLKMAISEEEMRQIYLIVKEVLS
IDPKTSNGGDSVFHLAVSSSSTLKSNSFLDEENAPLFPSLELTKFILKCD
FDVHKRNNLGETPLHIASKPANYSKETMPLRNATTRRKSPARTMTRQRSS
LSRVVSTSTNTSYKEDEVYEMLYKKNANVLARWPGTSLYYKAVVTYVRDE
DNEYDVKYEDGTVFTIKAKDVMKPTANTRRVSRGRSKSRTRDSGAKKVEP
KDEKPQEEKPNRKGRRSVPRATKVVANSETDEKEDEEIKTKTKSKSTMKI
SNSLKSLRTSVVGKSEDIDIQIKDIGVKKTMNHKNSIKSRMSLSEAKAVN
NISDSDDESDVVTLNTFRSRKSLLSLDTPTLSNHVKKNSDIDTLAEKIYQ
RTSARIASKLVELSSDDERPKLVPNPDIPLRRKPKTSIWSKISFEWLTCL
FFMILGAFILFSLHLLCKSGSCKPAIPKVPQKLKSYWDPYSVGLIVAEIL
VISLLSLIPIGPLMTNVNGQEIRKNGFLTILAXFXLLPILVMKEVXLELV
NRRYFRLMISSFSLGIIASIFSYAISYFFPGPKTNKNSRGNTGNIIVDLF
HGRELNPTIWKFDLKLQTFRFSMISLALINAVLIGNYVMKNNENASPLVI
CAAVFQIIYAFDALFFEDFYFFSHDAMNNGYGXSMIXSYYTLPFLPTLIV
RYLLAKAPIEAPWYVVAGIVIVNMVGYIIFRASENQRCLFKRNPDDEGIK
HLERITSGANKKILSGSWWSLVRYPNYLGEVLIQWSWVLPAADGVKIPKS
QPPNPASNSVLLFDEVPSNLASNEIDKNSLSGSIWTVSNGTKNPSRLTTS
TIMDDDRSTIEDEKDPVEGNEFYDDDDDDESVPDTKIIFDKEFEDYFEDR
IHKSGXSMIFMSKTLGLLPVIWTEEDLEGECKTYLNFYTFILYICWVALF
VLTFIKLNVSTEWPSDTAFQHYMNKTNNGCVVLSSATFQANLGGQWISAI
LIVSCGILNSRSLADVFYSLSGVDSLLDLKEKQYSKLNRKIIWWCIFYIF
LWAGHGVTVYYLLEQSKFWHLLYFFXDVASYGIPIAYDLQYIFLCLSLRK
RYRTLNKQLCTKTKIWRLPVKPSGNINVLQNILQYRFDQIXEPKQEDLMK
TDIDKQNVPMDLWLKDEPGPNYKMMDGVESKPTKEEEQSLIAQLESLRCA
YVDLGDIIQEMNNMFSTALFSHLIALSISFIVWAYLNLFAIKHFEIVYTF
IGLCVLAFIRIFLVCCHAQNLKHESRKPLAGVCQITSVDGSPKLERLLVK
MTSQMYYNQPTLSCGDYFPLGQRSLLV
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