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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR003599 | Immunoglobulin subtype | SMART | SM00409 | IG | coord: 307..396
e-value: 6.1E-5
score: 32.4
coord: 175..260
e-value: 3.3E-6
score: 36.6
coord: 10..95
e-value: 8.0
score: 12.3
coord: 104..174
e-value: 2.6
score: 16.5 |
| IPR003598 | Immunoglobulin subtype 2 | SMART | SM00408 | IGc2 | coord: 313..385
e-value: 0.014
score: 24.6
coord: 110..177
e-value: 1.5E-7
score: 41.1
coord: 181..249
e-value: 1.7E-9
score: 47.5 |
| IPR013098 | Immunoglobulin I-set | PFAM | PF07679 | I-set | coord: 106..175
e-value: 5.1E-11
score: 42.1
coord: 177..253
e-value: 3.2E-12
score: 46.0 |
| None | No IPR available | PFAM | PF13927 | Ig_3 | coord: 315..382
e-value: 2.1E-7
score: 31.2 |
| None | No IPR available | PFAM | PF13895 | Ig_2 | coord: 273..298
e-value: 0.55
score: 10.2
coord: 59..94
e-value: 0.025
score: 14.5 |
| None | No IPR available | PANTHER | PTHR10489 | CELL ADHESION MOLECULE | coord: 34..395 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 259..395 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 36..97 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 88..174 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 178..265 |
| None | No IPR available | TMHMM | TMhelix | | coord: 21..43 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 259..298
e-value: 2.5E-4
score: 20.3 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 299..396
e-value: 8.4E-15
score: 54.3 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 59..115
e-value: 2.2E-9
score: 36.7 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 116..258
e-value: 1.8E-19
score: 69.1 |
| IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 183..258
score: 11.334 |
| IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 97..180
score: 11.043 |
| IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 35..93
score: 6.851 |
| IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 301..394
score: 11.116 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000004785 ID=EMLSAP00000004785|Name=EMLSAP00000004785|organism=Lepeophtheirus salmonis|type=polypeptide|length=396bp
MRKDGNTPLHAELLIKYTHQVTKTFFIAPLNIIIIKILWFHASSSDYSLL
PNIDYFVTEGTILITRVSTSHGGKWTCKASNSRGYESSDVHLTVQTPLSL
RLYPPAQRVDVGKEVRIECAYRGFPLKDVYWVKDGVQLTLFPRGEIHKGD
NVSTLRIHSMDRRDKGLYQCFVEGESQILSQPGSSLSISCKATGSPLPSI
SWFVDGRPIYSGVFNKTLGKDVFLSTLDISSISASEGGHYSCVAENELGF
MTHGQRVDVYGPPFIKPMDPLSVLAASDVLIHCPYTGYPILQVKWTKNVP
PKIEPFHFKDDLQVGGRIRVSCTASLGDLPIKFEWLFNSHRLLEGEHSNG
ISITTVDAFSSSLVIPKLSTGHSGNFTCVASNSAASDTFSSSLTVN back to top
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