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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001314 | Peptidase S1A, chymotrypsin-type | PRINTS | PR00722 | CHYMOTRYPSIN | coord: 141..155 score: 38.19 coord: 228..240 score: 70.91 coord: 83..98 score: 38.68 |
IPR001254 | Peptidase S1 | SMART | SM00020 | Tryp_SPc | coord: 38..270 e-value: 3.7E-59 score: 212.5 |
IPR001254 | Peptidase S1 | PFAM | PF00089 | Trypsin | coord: 289..343 e-value: 7.7E-9 score: 35.3 coord: 39..260 e-value: 8.5E-51 score: 172.5 |
IPR001254 | Peptidase S1 | PROSITE | PS50240 | TRYPSIN_DOM | coord: 39..321 score: 28.374 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 104..262 e-value: 6.4E-49 score: 165.9 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 39..103 e-value: 1.2E-18 score: 66.1 coord: 289..341 e-value: 6.5E-11 score: 41.2 |
None | No IPR available | PANTHER | PTHR24276 | FAMILY NOT NAMED | coord: 36..261 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..23 score: 0.708 |
IPR018114 | Peptidase S1, trypsin family, active site | PROSITE | PS00135 | TRYPSIN_SER | coord: 229..240 |
IPR018114 | Peptidase S1, trypsin family, active site | PROSITE | PS00134 | TRYPSIN_HIS | coord: 326..331 |
IPR018114 | Peptidase S1, trypsin family, active site | PROSITE | PS00134 | TRYPSIN_HIS | coord: 93..98 |
IPR009003 | Trypsin-like cysteine/serine peptidase domain | SUPERFAMILY | 50494 | Trypsin-like serine proteases | coord: 30..262 |
IPR009003 | Trypsin-like cysteine/serine peptidase domain | SUPERFAMILY | 50494 | Trypsin-like serine proteases | coord: 263..342 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000004826 ID=EMLSAP00000004826|Name=EMLSAP00000004826|organism=Lepeophtheirus salmonis|type=polypeptide|length=345bp MELKIMILHITCMLLALSLKTEGQRRKKKDIMFQGDGKIVGGNAVKPNSI PYQISFQLKSGFHFCGGSIIDKVHMSILEFSMSSLESLKDTVLTAAHCCQ NFEPEEVQIVAGEHNLSKVSGIEQIANVSFIKYHEDYATKGTNNDICLLK LESSLEFNDKVDAVNLPRKNKKFKGKVRVSGWGSVTPGGESSDFLRSVDV KIMSFAKCNLLYLNALDKSMLCAGARRKDSCQGDSGGPLTKKNTLVGVVS WGIGCASPWFPVMMRFLYILLFLAVAANVGPIMKHSGRIVGGEEVEPNSN PFHISFQTTGGFYFWGASVMDKDTIITAAHCFDSGRPKDVQIIAS back to top
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