EMLSAP00000005028, EMLSAP00000005028 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005028
Unique NameEMLSAP00000005028
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length553
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 366..388
score: 31.23
coord: 33..49
score: 47.81
coord: 55..73
score: 35.63
coord: 85..104
score: 47.18
coord: 400..412
score: 45.52
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 2..139
e-value: 8.1E-89
score: 296.7
coord: 398..527
e-value: 8.1E-89
score: 296.7
IPR002423Chaperonin Cpn60/TCP-1PFAMPF00118Cpn60_TCP1coord: 31..527
e-value: 9.4E-144
score: 479.5
IPR002423Chaperonin Cpn60/TCP-1PANTHERPTHR11353CHAPERONINcoord: 1..553
IPR002423Chaperonin Cpn60/TCP-1SUPERFAMILY48592GroEL equatorial domain-likecoord: 398..527
coord: 13..142
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 204..366
e-value: 2.1E-51
score: 173.9
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 202..371
IPR027410TCP-1-like chaperonin intermediate domainGENE3D3.30.260.10coord: 146..203
e-value: 2.6E-36
score: 123.1
coord: 367..397
e-value: 2.6E-36
score: 123.1
IPR012720T-complex protein 1, eta subunitTIGRFAMTIGR02345TIGR02345coord: 2..529
e-value: 1.2E-257
score: 853.1
IPR012720T-complex protein 1, eta subunitPANTHERPTHR11353:SF22CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ETA SUBUNIT, TCPHcoord: 1..553
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 85..93
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00751TCP1_2coord: 57..73
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 36..48
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 361..397
coord: 146..206

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005028 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005028EMLSAT00000005028-700875Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005028 ID=EMLSAP00000005028|Name=EMLSAP00000005028|organism=Lepeophtheirus salmonis|type=polypeptide|length=553bp
MQPMILVLKDGTETAQGKSQIISNINAXEAVSNAVRSTLGPRGMDKLIVN
DRGIATISNDGATVLRLLNVVHPAGKTLVEIARSQDSEVGDGTTSVVILA
GEFMKCCKSFIEEGVHPRLIIKSVRQATTLSIEKIKELSVSIPDGKRDLL
EKCAATALSSKLIHQQKGFFAKMVVDAVETLDPLMPLNMIGIKKVQGGSL
EDSSLVPGVAFKKTFSYAGFEMQSKHFKNPKIALLNVELELKAEKDNAEV
RVDNVEEYQKIVDAEWAILFDKLDALVKCGANVVLSKLPIGDVATQYFAD
HSMFCAGRVTEEDLNRTMKACGGTIQTTVNGXCDENLGRCELFEXNQVGG
ERFNFFTGCTKSRTCTLLLRGGVEQFMEETERSLHDAIMIVRRAMKNDRV
VAGGGAIEMELSKYLRDYSKTIKGKEQLIIGAIAKAYEIIPRQLCDNAGF
DATNILTKLRQKHSQSLNRRSEGGIGHNWYGVDILTEDIADNFAACVWEP
SIVKINAITAASEATCLVLSVDETVKNPRAAQGDQGMGGGMPGMGRGRGR
PMM
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