EMLSAP00000005042, EMLSAP00000005042 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005042
Unique NameEMLSAP00000005042
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length228
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..81
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 133..228
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 215..226
score: 97.79
coord: 166..186
score: 93.56
coord: 146..165
score: 93.38
coord: 203..215
score: 92.76
coord: 131..142
score: 78.92
coord: 188..202
score: 95.1
IPR001951Histone H4SMARTSM00417H4coord: 16..90
e-value: 8.3E-18
score: 75.2
coord: 142..216
e-value: 2.9E-29
score: 113.2
IPR004823TATA box binding protein associated factor (TAF)SMARTSM00803TAFcoord: 154..219
e-value: 0.0086
score: 17.0
IPR009072Histone-foldGENE3D1.10.20.10coord: 3..81
e-value: 1.7E-40
score: 136.7
coord: 113..133
e-value: 2.5E-6
score: 27.0
coord: 134..228
e-value: 1.1E-55
score: 185.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..80
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 132..227
IPR007125Histone corePFAMPF00125Histonecoord: 154..220
e-value: 4.0E-14
score: 52.3
coord: 28..80
e-value: 2.8E-8
score: 33.6
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 141..145
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005042 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005042EMLSAT00000005042-700889Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005042 ID=EMLSAP00000005042|Name=EMLSAP00000005042|organism=Lepeophtheirus salmonis|type=polypeptide|length=228bp
MTGRGKGGKGLGKGGAKRHRKVXRBNIQGIXKPAIRRLARRGGVKRISGL
IYEETRGVLKVFLENVIRDAVTYTEHAKRKXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTAMDVVYALKRQGRTLYGFGGGKGLGKGGAKRHRKVLR
DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYT
EHAKRKTVTAMDVVYALKRQGRTLYGFG
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