EMLSAP00000005090, EMLSAP00000005090 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005090
Unique NameEMLSAP00000005090
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length514
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 234..244
score: 36.77
coord: 353..374
score: 34.2
coord: 374..390
score: 45.39
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 230..238
score: 56.15
coord: 222..230
score: 60.25
coord: 189..204
score: 63.24
coord: 173..189
score: 55.29
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 170..241
e-value: 3.5E-40
score: 149.5
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 172..239
e-value: 1.9E-30
score: 104.8
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 173..199
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 170..245
score: 19.751
IPR003069Ecdysteroid receptorPRINTSPR01283ECDYSTEROIDRcoord: 495..513
score: 84.21
coord: 302..327
score: 53.02
coord: 239..248
score: 69.29
coord: 161..172
score: 58.33
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 352..486
e-value: 5.5E-21
score: 85.7
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 337..421
e-value: 1.8E-12
score: 46.7
coord: 432..488
e-value: 7.6E-5
score: 21.7
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 173..226
e-value: 2.3E-26
score: 91.8
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 438..512
e-value: 2.6E-17
score: 62.4
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 315..437
e-value: 1.5E-44
score: 152.0
coord: 227..257
e-value: 1.5E-44
score: 152.0
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 329..513
NoneNo IPR availablePANTHERPTHR24082:SF7ECDYSONE RECEPTORcoord: 112..514
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 112..514
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 171..254

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005090 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005090EMLSAT00000005090-700937Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005090 ID=EMLSAP00000005090|Name=EMLSAP00000005090|organism=Lepeophtheirus salmonis|type=polypeptide|length=514bp
MSTTQYTAIIQPRPXHDSVVPAVKRFRPNPPDNSSPTVIGLPPPPSSSPI
FASASSSPLIHQQHQQSLFIETMSNNGSYSTPSPILSEIKXXPHPXXPPP
PPTTTTLHQQHSQQNTHYYLNNSGESPSSPLENGLRHPNAPLTPTGAVQQ
YSQMVENERKKKGSSSRPAEELCLVCGDRASGYHYNALACEGCKGFFRRS
ITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPERTCI
QKRQAKAAAAAAAXXDTTVDPKSNNNGKNGSISIDMASFPKRLSSTKPLK
PEEEELINRLVYFQEEYEHPSEADLNRVYHVPMHSTNSSESESDRLFRHM
TEMTILTVQLIVEFSKHLPGFQNLCRDDQINLLKGCSSEVMMLRGARRYD
AESDSIVYATNYPFTKENYAKAGLGNDELFRFCRAMSRMKEPKRVEKIQE
IYVDALQAYVMANRKKNQMVTFAKLLYVLTELRSLGINNSELCFSLKLKN
RKLPPFLMEIWDIE
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