EMLSAP00000005792, EMLSAP00000005792 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005792
Unique NameEMLSAP00000005792
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1494
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..56
NoneNo IPR availableCOILSCoilCoilcoord: 288..319
NoneNo IPR availableGENE3D1.20.870.10coord: 495..591
e-value: 9.5E-60
score: 201.2
coord: 1117..1225
e-value: 9.5E-60
score: 201.2
NoneNo IPR availablePANTHERPTHR23113:SF51RAS GTP EXCHANGE FACTORcoord: 17..1486
IPR001895Guanine-nucleotide dissociation stimulator CDC25SMARTSM00147RasGEFcoord: 1220..1457
e-value: 4.2E-81
score: 285.4
IPR001895Guanine-nucleotide dissociation stimulator CDC25PFAMPF00617RasGEFcoord: 1225..1406
e-value: 7.5E-55
score: 185.4
IPR001895Guanine-nucleotide dissociation stimulator CDC25GENE3D1.10.840.10coord: 1226..1445
e-value: 9.5E-79
score: 263.6
IPR001895Guanine-nucleotide dissociation stimulator CDC25PROSITEPS50009RASGEF_CATcoord: 1224..1456
score: 66.542
IPR000651Ras-like guanine nucleotide exchange factor, N-terminalSMARTSM00229RasGEFNcoord: 521..682
e-value: 1.6E-8
score: 44.3
IPR000651Ras-like guanine nucleotide exchange factor, N-terminalPFAMPF00618RasGEF_Ncoord: 525..585
e-value: 9.4E-15
score: 54.4
IPR000651Ras-like guanine nucleotide exchange factor, N-terminalPROSITEPS50212RASGEF_NTERcoord: 522..642
score: 9.596
IPR000219Dbl homology (DH) domainSMARTSM00325RhoGEFcoord: 126..307
e-value: 2.9E-50
score: 183.0
IPR000219Dbl homology (DH) domainGENE3D1.20.900.10coord: 103..325
e-value: 7.8E-41
score: 139.3
IPR000219Dbl homology (DH) domainPFAMPF00621RhoGEFcoord: 130..306
e-value: 6.7E-35
score: 120.4
IPR000219Dbl homology (DH) domainPROSITEPS50010DH_2coord: 122..308
score: 28.289
IPR000219Dbl homology (DH) domainSUPERFAMILY48065DBL homology domain (DH-domain)coord: 104..325
IPR008937Ras guanine nucleotide exchange factorPANTHERPTHR23113GUANINE NUCLEOTIDE EXCHANGE FACTORcoord: 17..1486
IPR019804Ras guanine-nucleotide exchange factor, conserved sitePROSITEPS00720RASGEFcoord: 1373..1403
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 86..111
score: 8.023
IPR023578Ras guanine nucleotide exchange factor, domainSUPERFAMILY48366Ras GEFcoord: 1125..1458
coord: 514..576

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005792 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005792EMLSAT00000005792-701639Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005792 ID=EMLSAP00000005792|Name=EMLSAP00000005792|organism=Lepeophtheirus salmonis|type=polypeptide|length=1494bp
MYRRENQRQYELRADSINELVESEKTAKWQYTQHCEELTEEIKKLRNELF
SLKKEWRLLPQMSKTSSQEGRSSGNSSVEEEDPDLAKIKKVQSFFRGWLC
RRRWKQIVDEYIRSPHAESMRKRNCLVFRMVEAEEEYVEQMEILITCFYR
PFKMAASSKNPPCTHDDINSIFLNSETVLFLHQIFLKGLTARMESWPTLV
LGDLFDMLLPMLSIYQEYVRNHHYCLQVLTECKQSPSFAQLLNRLEKKPA
CKGRSLEIFLTYPMHQIPRYIITLHDLLAHTPPDHVEKKSLEHARDQLED
LSRQMHDEVSETENIRKNLAIERMIIEGCDILLDVNQVFVRQGTLIQILP
SPSSSRPGRSRLNIGREKEREAVRQCFLFSNHLIMTTRTQAGRLHLVEGT
GKIPLANVTLIEDPNEDDRNDDQEYPGSSGSLSDEGEGNTPNTGGKNNLN
QNEKKDFKIIQEKAAWITDISQCMDNVHFNGLFYNTLPNASSSTLPQCVK
SDPSLFKDDVDIRFSKTFNTCKIPQIRYATPERLLQRLTDLRFLNIDFLN
TFLLTYRVFTDSITVLEALKNVFNTSEPLESSSSSLSSIENLGEGHTQHV
HHQVTSIPSTECEGKRRISTCSGYSTATGIRNNLVCVFHPKYHLESNDSD
NNLANLPNVSHHPDTGTNSRHGSLTPRRISGASSVSGYCSDERGSFSTEG
GLTPHMKPQHWRYSFRRYEEEQRETTLGVSSNLQNVEVLSRFGSGSGTGG
RRKGSYDSICSGRSGSIVSTFRKESVPIIEQTEPISEMDDASSNGTSTTE
KMEEEISISHSNVSKDTQXSSSSXSSSXATSSINTDNKSLVKVKSDTGTP
YLAVPPHLAASSSAETLTDDPKEKNVQKEVEEGQSSAKVSEKHHGXQPMK
RQNSFEEPSKIADLAKTMVNMPKADITLKGIADKAVEEVGLVGLAHKFTR
KTGIRTNTSSSSSGSYTTPYTFNLEEGEKDATVASSGGSTGGTSIPGSHH
SSFSSTSTTRALFGGITFKDFKSPTREIRKKKGLFHNEFCNSGSSSISGP
SGGTSQNPGSNTNTPISSPQHSSKIGVIITSSRQANRRSSSACASIAFAV
ATAGSGNPSNNRSPAKKSEDFKELSKRKGSMSSNATTMRVLSVLRHWVTK
HPQDFEANPTLKSASIEFLDDINCIPSLLPAEHRASTQILRMLTKDESDK
NKMNLEEILKGTETPSKETILSLLALEIAEQMTYLDQKILFAIPCSEFLG
QAWTKKDRNIRAPNIVQMTKFFNDFSRLVCSEIISQTCLNSRIMVIEKWT
AVADICRCLHNFNGVLQICAAFTNSSVFRLKNTWNRVSKSVRHTIDKLQS
LVSSDGRFRNLRDTLHRTDPPCIPYLGMYLSDLTFIEEGTPNFTESGLLN
FAKMRMIAHVIREIRQFQQTPYKIERIPKVVNYLLDSGKLMDDEEMYQRS
LMVEPXASRLSSSFGXSMAXAAATVAARHSSAQQEKDSHGTTPN
back to top
Add to Basket