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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 794..815 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 439..585
e-value: 4.6E-34
score: 116.6 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 74..260
e-value: 3.1E-32
score: 111.1 |
| None | No IPR available | GENE3D | 1.20.1320.20 | | coord: 278..414
e-value: 3.2E-20
score: 71.9 |
| None | No IPR available | PANTHER | PTHR14025 | FAMILY NOT NAMED | coord: 57..623 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | SMART | SM00487 | DEXDc | coord: 70..268
e-value: 5.3E-26
score: 102.4 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 81..249
score: 22.543 |
| IPR001650 | Helicase, C-terminal | SMART | SM00490 | HELICc | coord: 477..568
e-value: 7.3E-20
score: 82.0 |
| IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 503..567
e-value: 1.1E-19
score: 69.9 |
| IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 447..614
score: 17.077 |
| IPR020819 | DNA repair nuclease, XPF-type/Helicase | GENE3D | 3.40.50.10130 | | coord: 1404..1535
e-value: 1.2E-7
score: 31.0 |
| IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | PFAM | PF00270 | DEAD | coord: 82..237
e-value: 6.2E-18
score: 64.7 |
| IPR011335 | Restriction endonuclease type II-like | SUPERFAMILY | 52980 | Restriction endonuclease-like | coord: 1404..1529 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 118..271
coord: 444..585 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000006227 ID=EMLSAP00000006227|Name=EMLSAP00000006227|organism=Lepeophtheirus salmonis|type=polypeptide|length=1620bp
MSKQTTLLQTWGYSGNENVFEDGDDEDMESILVEALDQSTLRPSRDPPIA
DKKESIGFDLDAGRTWIYPINYPLRSYQLSISETCLFQNTLVSLPTGLGK
TFIAAVVMYNFYRWXPEGVIVFLAPTKPLVAQQIHACFNIMGIPAKDVAX
MTGNNPVNSRKKDWSSKRVFFLTPQVLSNDLSRGLLPTSSIKCVVIDEAH
RARGEYAYCQVIKELRMSGEYFRVIALSATPGNDIKSVQSVLMNLGISKI
ELRSEDSPDIVPYTFKRNIDKVVVPLSAEMEDIKDKYSALLEIFVGRLHR
FGVIGQNKKEIKVSSVSKFMLLQCRNEFRQNPPTKYVNDRGGQGKVEYNF
ASCISLFHAYELLHQHGLRPFYNFLLKTTDVHSGSKSLISELSKNQLWTD
IMGYLQNKFDGDSSNPILNSSRPNLSQKLSQRKDSKDFTSGHPKINKLLE
IVLKHFREKGDALSRVMIFSQYRDSVKEITASLHSHKPMVRAIEFIGQAG
TKVKKGLTQKEQIEVIKRFREGGYNTLVSTCVGEEGLDIGEVDLIICFDV
SKSPIQLIQRMGRTGRKRSGRIVVLVTKGKEEIAYNQCLYSKKSINRAIL
EKHQLANFFQKSPRMIPHDIHPKETSTTKKSRSKRVVSTHKDSNSINIDP
FETTEIIKPKENMNTENESQRPLQKLISSYSMYSSILDSVDSDENESEAI
EMKSLPPPSPSLNVSERVNSPFVANIPECEALSEVSSCKKNVSIVEVESG
SDHFETIKSEFDDLYSEESNLDIKRFQLELFNEEEEEGEDYSILEMAKFN
SDDILEEYEKIKNEFTQNNVSKMRPSLIQNENNFGIQTSTPRNKSSTILS
KNTLTSLYSSPPGSTKAQAPHFSVSPHNNKSKSGKVDENLGLFPNFDMEF
DHEDFFEEIDFDLSNKSTPRKDTSKSQKSLYSATQLTSFVSKNMAACSNT
SSPKSKNSPKIKSSLRKETLQKGFSMSQANFEIELNSDEDMFADSILYNE
EILNISKKEPPQNNNKSIDSPSNVRLNSSFALSQSSLNLSRSGGKKSRVS
FFDESEHFLPPSKKSLSYRDSSNLNSDNSGRDSDDSVVVVYDDSQKMQKS
MSDNKSVSSARHSSDRSSYLTQNSPIVSMKKRKKSAFESDSDGESDFIIS
KDKSHNQPGLKKRSSTKNKRNSFINKEVEVEDSDASPDEFGNESQFPDLD
CYDASFVDDATQNHQGTTDTFEMYLHSSKEQGGRTGIFKXPSKPLAPITA
DIYSQLPNQDSEDEYENDSFCVDDDDDLEYSDSKDNGDNTMALIVDSKSS
NVFKKSKKSRIRRPADDDSETSEEELKEDKVLVSPPLCTSLPKLKKGSDK
EERILVNSHVKDSKKSRILCPIDDPQSSEEDTVLVSSPLSKVFSNIKKDA
DKECILVNSSEFQSCHELISNLKYTFKRQVCVRSFEGAGFIISPRLAXDR
ISYSNFLSGAQRQKIIKRCQLMNDLYERSYIILELEEDVKAFNQRTKYAD
MILCQISQSNIRLLYSKNQKTSAELISNLLSKESNKGLSFKSLLLQKGSI
FNDEDFKIVSFFKSVPGIGVGTGYLLSSNYSTVSSFATSAVSTLMRKGHL
EKDKASQVQDFLRKTFNPSS back to top
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