|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002815 | Spo11/DNA topoisomerase VI, subunit A | PRINTS | PR01550 | TOP6AFAMILY | coord: 252..273
score: 47.73
coord: 140..151
score: 36.98
coord: 154..171
score: 27.08
coord: 172..187
score: 54.3 |
| IPR002815 | Spo11/DNA topoisomerase VI, subunit A | SUPERFAMILY | 56726 | DNA topoisomerase IV, alpha subunit | coord: 117..344 |
| IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain | SMART | SM00146 | PI3Kc | coord: 2329..2580
e-value: 2.9E-92
score: 322.5 |
| IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain | GENE3D | 1.10.1070.11 | | coord: 2375..2571
e-value: 3.5E-65
score: 218.6 |
| IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain | PFAM | PF00454 | PI3_PI4_kinase | coord: 2329..2531
e-value: 3.3E-40
score: 137.8 |
| IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain | PROSITE | PS50290 | PI3_4_KINASE_3 | coord: 2328..2562
score: 61.09 |
| IPR001263 | Phosphoinositide 3-kinase, accessory (PIK) domain | SMART | SM00145 | PI3Ka | coord: 2025..2216
e-value: 9.1E-5
score: 4.8 |
| IPR001263 | Phosphoinositide 3-kinase, accessory (PIK) domain | PFAM | PF00613 | PI3Ka | coord: 2068..2209
e-value: 2.5E-18
score: 65.8 |
| IPR001263 | Phosphoinositide 3-kinase, accessory (PIK) domain | GENE3D | 1.25.40.70 | | coord: 2086..2196
e-value: 2.3E-13
score: 49.4 |
| IPR001263 | Phosphoinositide 3-kinase, accessory (PIK) domain | PROSITE | PS51545 | PIK_HELICAL | coord: 2024..2199
score: 14.639 |
| None | No IPR available | GENE3D | 3.40.1360.10 | | coord: 181..281
e-value: 3.0E-20
score: 72.2 |
| None | No IPR available | GENE3D | 3.30.1010.10 | | coord: 2211..2374
e-value: 5.3E-42
score: 142.9 |
| None | No IPR available | PANTHER | PTHR10048:SF15 | PHOSPHATIDYLINOSITOL 4-KINASE ALPHA | coord: 743..2583 |
| None | No IPR available | TMHMM | TMhelix | | coord: 1281..1303 |
| None | No IPR available | TMHMM | TMhelix | | coord: 1135..1157 |
| IPR013049 | Spo11/DNA topoisomerase VI, subunit A, N-terminal | PFAM | PF04406 | TP6A_N | coord: 116..178
e-value: 3.8E-12
score: 45.5 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 45..179
e-value: 4.0E-17
score: 61.8 |
| IPR015433 | Phosphatidylinositol Kinase | PANTHER | PTHR10048 | PHOSPHATIDYLINOSITOL KINASE | coord: 743..2583 |
| IPR018936 | Phosphatidylinositol 3/4-kinase, conserved site | PROSITE | PS00915 | PI3_4_KINASE_1 | coord: 2332..2346 |
| IPR018936 | Phosphatidylinositol 3/4-kinase, conserved site | PROSITE | PS00916 | PI3_4_KINASE_2 | coord: 2423..2443 |
| IPR016024 | Armadillo-type fold | SUPERFAMILY | 48371 | ARM repeat | coord: 2020..2197 |
| IPR011009 | Protein kinase-like domain | SUPERFAMILY | 56112 | Protein kinase-like (PK-like) | coord: 2211..2576 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000006457 ID=EMLSAP00000006457|Name=EMLSAP00000006457|organism=Lepeophtheirus salmonis|type=polypeptide|length=2583bp
MIFKYNRDKLRYFWNTISSIRECEWNWSPLNPNVGSDRERLSPQERRIYA
IQAVQACIREQIQDLLSGQNPTFYSPNRKDWNYVQYDPSYGLVPVEDSLM
ALGAVKTSLYVRGSQNKYTKIMFVLQMILKLLMDDTRATQRDMYYQRAKD
FKNQHELNESLFVISSMLQISRYDLHILTTSKGLIYGDFNYVDPDNFHLV
DCRKSVTNVPDNVLGIRQMSSNAKLCLVVEKDAVFQRLVNSNLLHIFNGE
VIIITGKGVPDVNTRQLLHRIYQCFKVGSVCMCRHRYTKSLHFVLLFTFL
YLLEMNEPDVRRCHSLLNRPYIDDFMIMQIEYMLEVNKKAEIQSESILSY
IRKRRSCSADILNSILDMLDSDPLKLYRSTIFSLARSLAKIQDVEWDRIR
DPLFSQCPSRDSVELTEKNQDALIALGIFLLESKGAWKNKIVPYLLHVES
QLYRTKVLVRKSPDGKVPVGESFSFSLNTLLSDIAVNCLDYRSDIFIAQI
TLMEKLVKIIEKGRENQNEDTHHSEYLCCTVVPVLLGTSRAMGRFSHSND
FLLNKLFPPKPQVQVPPSISTVKNYNKSHFNNFRSIIPKSLSRTFQNHRE
IINSQSVDSIVDLSFRPSLRADLMVYQSHRQSLSYQKKLAFQSQQSVQPY
DPTNYFFHKYGSSFHQIQAPLTKTCTSHGMFDTCKNKLAFPSEHIESLFR
LXKKTLNKXVLEFLDNLCVETFDLESLKQWPYKTFLEIVSLSMISVLREV
LHTSHGLSSSFIKEIQIFVKKLFLSGQTELQTKDSEINGELEEHIPSSEK
PVVNKFKLNVQTNAVCVDILVYVTRDEKGADSLVSKLTDKISTTSSHRLI
LAHMPLIMVCIEGLGKMSEKFPSLAKQSSDCLREFLTNPSPILTRLYRHN
LDYTKXLPNITXSDTESNQSTQNIAENKKVNACYVAFEKLRDCAIENLCV
CLKASLDRDYNSIPALVSAVTTRLFHPDSVKDKNWNLSSANTILALGHIA
VILRNSEDNTKAVLKFMLQWFDTSPSEQDTMLIDQMGCIAISRTAIDGIY
TEIMKKFKEIIKEASQTVYGGQHHSATDRRNKYQRCSGAVINALGNIAAN
IQGLILLNDFLIKMMELYVNIGLEVKKLSDKTERGLLKASNSAGNLGVLI
PVIAVLIRRMDDKDLSNPNNRLKKFFSDFWLYAVVFGFTKDDNGLWPQDW
YDGVSEIAAKAPKLTFSTGEKHEIRVMKVTQAISTEGVTYAELQEMKTQL
LALLDNPPVMVNLVPKYXSVSRHYNIAVDTYFIYVFFYYYYFRFPIIIYL
TSVYWLXYLRLKMVTXVSSFNKLFDYLEDKAIQVDKNGIYECISSIVTKL
FSEYCQTMAEKSKTKAXXRNLEIIAVILLIEFNNPNRNIRKRSDVFLSEL
VDKFPHLLWSKAVLFGMLNALQQLKSSINNEDSQEVEIGRIKRKVILMDX
LQERXEILLDFAQRIKQFIKTSMEWAPGTVQSHLQEYINTVTQINYYNHA
GVSLASECIQNLSSGLERSGTLRSTGLTQINSGKIDASLFLSAMTKRLSN
TSSVSALLYDKSGVKRYNVIKSFFEELKEGASLASGLDSSSDSIEKGKKQ
FHNAMWKMTASLILIKPAIDDGLLFEITRAPLKLFEEESMKTVVECWNWL
LSARPDMEMPFLQEMIAAWHSAQHANLGLFAKDDVDASSPLAPDEKMKTE
VKPIRPIVAPHDIWIRFIQERIEIAKYCNRDQIIMFTLMLQRTLAIKVGS
AECLMTRHSSTAGTRFRLLTCGMSLLQGDVLHKSLAKNVLRQRIYSVALD
YFCSDKKYPTQTGNELSEDIQIMLKFWTVMHADKKYIKSHMVGDLDGLVS
ERNFTHANAGGYSITGGSIAINSSISNYNSAYNFDNRSISSEFGRNPIVT
STIGGGAGNSNIGWMNTVPLASNGGTNTLTKRSVSRQQQRHFIANDSLVK
DYTKKRWLILSLLSVEIETLVTNQNPLIETREALASLLTNRDYGTTAVGN
VGRQYEDAMKFLDDVRNRTTDKSWKENARNAWDVSPALAVFLPSRFKSVV
LENDVTILVQAHPTEVCHLDKALDFFLTKDSIENDSSILPYILTWKRCSP
LKALSLLCPRTIPTHPLTAQYAVRVLSSYPSEAVLFYIPQLVQATRWDDL
GFVKEFIKNISKKSNLVAHQLIWNMETNMFTDEEGLEKDPEMYERLVPLR
QAIENGLSGAAKKFYTREFDFFKKVTQVSGKIKEYPKGQQRKTACVKALQ
EIVLQHGCYLPSNPEALVLDIDRTSGTPMQSAAKAPYLARFKVRRLGINK
LEQKGIEYSENEDESVISNDDQHAEYWQAAIFKVGDDCRQDMLALQVIEL
FQYIFRQAGLDLFLFPYKVVATSPGCGVIECVPDAKSRDQIGRKVNIDLH
QYFIKEFGEGQKYKKARRCFITSMAAYSVIGFILQIKDRHNGNIMVDKHG
HIIHIDFGFMFESSPGGNLAFEPDMKLTTEFVEIMGGKMEASGFRRFMXL
CVQAYLAIRPYSKDIIHLVQLMLDTELPCFRGQTIEQLRGRLQPTASDLV
ASSYMISVIKNSFLNFRTRAYDMLQYQQNSIPY back to top
|
