EMLSAP00000007346, EMLSAP00000007346 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000007346
Unique NameEMLSAP00000007346
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1113
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..105
NoneNo IPR availableGENE3D1.10.287.70coord: 918..1028
e-value: 2.1E-37
score: 126.3
NoneNo IPR availablePANTHERPTHR11537:SF22VOLTAGE-GATED POTASSIUM CHANNEL SHAKERcoord: 615..1075
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 769..1027
NoneNo IPR availableTMHMMTMhelixcoord: 978..1000
NoneNo IPR availableTMHMMTMhelixcoord: 825..847
NoneNo IPR availableTMHMMTMhelixcoord: 1002..1024
NoneNo IPR availableTMHMMTMhelixcoord: 857..879
NoneNo IPR availableTMHMMTMhelixcoord: 770..792
NoneNo IPR availableTMHMMTMhelixcoord: 941..963
IPR003091Potassium channelPRINTSPR00169KCHANNELcoord: 911..937
score: 73.2
coord: 766..794
score: 54.35
coord: 827..850
score: 60.57
coord: 971..993
score: 75.84
coord: 1000..1026
score: 78.66
coord: 685..704
score: 51.86
coord: 853..873
score: 56.65
coord: 940..963
score: 63.45
IPR003968Potassium channel, voltage dependent, KvPRINTSPR01491KVCHANNELcoord: 685..695
score: 59.17
coord: 940..954
score: 60.72
coord: 916..924
score: 85.28
coord: 1011..1022
score: 86.18
IPR003972Potassium channel, voltage dependent, Kv1PRINTSPR01496SHAKERCHANELcoord: 729..740
score: 64.23
coord: 672..683
score: 64.23
coord: 786..797
score: 92.28
coord: 686..696
score: 53.88
coord: 763..779
score: 73.31
IPR000210BTB/POZ-likeSMARTSM00225BTBcoord: 643..743
e-value: 2.6E-6
score: 37.0
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 827..1022
e-value: 3.2E-32
score: 111.3
IPR011333BTB/POZ foldGENE3D3.30.710.10coord: 643..741
e-value: 8.4E-32
score: 109.0
IPR011333BTB/POZ foldSUPERFAMILY54695POZ domaincoord: 643..739
IPR027359Voltage-dependent channel, four helix bundle domainGENE3D1.20.120.350coord: 755..917
e-value: 2.2E-45
score: 153.4
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 645..735
e-value: 1.9E-27
score: 95.1
IPR028325Voltage-gated potassium channelPANTHERPTHR11537VOLTAGE-GATED POTASSIUM CHANNELcoord: 615..1075

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000007346 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000007346EMLSAT00000007346-703193Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000007346 ID=EMLSAP00000007346|Name=EMLSAP00000007346|organism=Lepeophtheirus salmonis|type=polypeptide|length=1113bp
MHSAVYSDSLNYPDRSGAPRSVTSSSASPGIFSVTSSTERGSISLSGGGG
IPRSKISASLSALSGDGKEIKYEQDIEFLNTSRLLRYQRDKSEKKKRLKR
IKKLQIYKKQRARRERIERMKKNNDEAHEKKLINIFKNDLQIGVGGGGNA
WMKIMGIGADQVKRANKGKGGKGSASDMIDKGMSFAVGAFSXNLRNTRGP
NVSSSSGNPVVSSSSGCYSNNNSNKDSSLISKYFSNIQSSGVGDHNTILE
EDHYDNLENLTTFHGNDGESKRNCHINLKSHQFDTLRNILSKCKKTFKVL
LESTIVHHHTIXPCQPPQXSSLFPPXPQLPLLLLLFQGMNVSVGGTTQHL
RDNSNIDRGSPFVLPYSAAACTPVSVRIIRHSADKKVPVKSCNKSPWNKT
STMVLNTDTGGGPGNSEKRHPKLKNTKQSSIIESILGPAFSGTSLSRNVS
LTQSIGWDEREENDFEFLPGMTYSTMRPLTNKYLQCFQLHFAQFHIFIYI
NNGIQKMYSSSSKNRPFPLVDYITQWRXKASSNASGGGLHNSKNNNSSSR
NSTSVNPEDSAALLLNRYSRSNYTXSSTLTSPVDQPYPVPTAFLVSPYED
PEEELSPSLPQLSPHDDEGVHQNPQYTGQHHFHPVIHDHDYCERVVINVG
GLRYETQIRTLNQFPDTLLGDPSRRIRYFDPVRNEYYFDRHRNCFEAIIY
YYQSGGRLRRPVNVPLDVFSEEIQFYELGDYAITKFREDEGFIKEEEKPL
PTNDLQRKVWLXFEYPESSQXARIVAIISVFVILLSIVIFCLETLPEFKH
YKVFNTTANGTKIEEDEVPDVTDPFFIVETLCIIWFTFELLVRFLACPSK
YVFAKDIMNMIDLVAIIPYFITLATIVAEKEEVIAPKAPVSPNKEGNNXA
MSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLMFFLFI
GVVLFSSTVYFAEAGSPXSHXKSIPDGFWWAVVTMTTVGYGDMTPVGVWG
KIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVQSC
PYMPGFLGESLKKNPALSESSSDILDLEEGIFSSNGNPSYLHHNCNTRHN
NNIVTNLSIETDV
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