EMLSAP00000007472, EMLSAP00000007472 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000007472
Unique NameEMLSAP00000007472
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length426
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027361Nicotinic acetylcholine-gated receptor, transmembrane domainGENE3D1.20.120.370coord: 124..229
e-value: 4.7E-65
score: 217.4
coord: 375..423
e-value: 4.7E-65
score: 217.4
IPR006029Neurotransmitter-gated ion-channel transmembrane domainPFAMPF02932Neur_chan_membcoord: 131..415
e-value: 1.9E-53
score: 181.7
IPR006029Neurotransmitter-gated ion-channel transmembrane domainSUPERFAMILY90112Neurotransmitter-gated ion-channel transmembrane porecoord: 124..243
coord: 299..425
IPR006202Neurotransmitter-gated ion-channel ligand-bindingGENE3D2.70.170.10coord: 18..62
e-value: 4.4E-7
score: 29.0
coord: 67..123
e-value: 2.7E-14
score: 52.6
IPR006202Neurotransmitter-gated ion-channel ligand-bindingPFAMPF02931Neur_chan_LBDcoord: 75..124
e-value: 1.4E-7
score: 30.8
IPR006202Neurotransmitter-gated ion-channel ligand-bindingSUPERFAMILY63712Nicotinic receptor ligand binding domain-likecoord: 17..63
IPR006202Neurotransmitter-gated ion-channel ligand-bindingSUPERFAMILY63712Nicotinic receptor ligand binding domain-likecoord: 68..123
NoneNo IPR availablePANTHERPTHR18945:SF70NICOTINIC ACETYLCHOLINE RECEPTOR SUBUNIT ALPHAcoord: 9..419
NoneNo IPR availableTMHMMTMhelixcoord: 187..209
NoneNo IPR availableTMHMMTMhelixcoord: 402..424
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
IPR006201Neurotransmitter-gated ion-channelPANTHERPTHR18945NEUROTRANSMITTER GATED ION CHANNELcoord: 9..419

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000007472 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000007472EMLSAT00000007472-703319Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000007472 ID=EMLSAP00000007472|Name=EMLSAP00000007472|organism=Lepeophtheirus salmonis|type=polypeptide|length=426bp
MISTKILLSIETICGYHEKRLLFALIQNYNQLXRPVVXESEPLMLTFGIT
LQQIIDVKLNNEHRFFQLDLTLKDEGKGGDISSFIPNGEWDLIGVPGTRH
ELFYECCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPP
DSGEKLTLDVTVLLSLTVFMNIVSQIMPTTSDAVPLIGTYFNCIMMMVAS
SVVLTVVVLNYHHRTAETHDMPPWVRTAFLQWLPWILRMNRPGKPITRKS
ILMTNRIKELELKEKTSKSLLANVLDMDDDFRPMSVAGGYGTGANSGSTP
GASGFMRVNGNPMDSSGGAPVTDKAPPPPTSSPYPIHGAPSAPPPPPPPG
SCTFGTGGSNRELQCILKELKFITNRMKIMDEEEEIMSDWKFAAMVIDRF
CLITFTAFTVITTVAVLLSAPHIIVE
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